TY  - JOUR
AU  - Jung, T.
AU  - Milenković, Ivan
AU  - Balci, Y.
AU  - Janousek, J.
AU  - Kudlacek, Tomas
AU  - Nagy, Zoltan
AU  - Baharuddin, B.
AU  - Bakonyi, J.
AU  - Broders, Kirk D.
AU  - Cacciola, S. O.
AU  - Chang, T. -T.
AU  - Chi, N. M.
AU  - Corcobado, Tamara
AU  - Cravador, A.
AU  - Đorđević, B.
AU  - Duran, A.
AU  - Ferreira, M.
AU  - Fu, C. -H.
AU  - Garcia, L.
AU  - Hieno, A.
AU  - Ho, H. -H.
AU  - Hong, C.
AU  - Junaid, M.
AU  - Kageyama, K.
AU  - Kuswinanti, T.
AU  - Maia, C.
AU  - Majek, Tomas
AU  - Masuya, H.
AU  - Lio, G. Magnano di San
AU  - Mendieta-Araica, B.
AU  - Nasri, N.
AU  - Oliveira, L. S. S.
AU  - Pane, A.
AU  - Perez-Sierra, Ana
AU  - Rosmana, A.
AU  - von Stowasser, E. Sanfuentes
AU  - Scanu, Bruno
AU  - Singh, R.
AU  - Stanivuković, Zoran
AU  - Tarigan, Marthin
AU  - Thu, P. Q.
AU  - Tomić, Z.
AU  - Tomsovsky, M.
AU  - Uematsu, Seiji
AU  - Webber, Joan
AU  - Zeng, H. -C.
AU  - Zheng, F. -C.
AU  - Brasier, Clive M.
AU  - Horta Jung, Marilia
PY  - 2024
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1492
AB  - During 25 surveys of global Phytophthora diversity, conducted between 1998 and 2020, 43 new species were detected in natural ecosystems and, occasionally, in nurseries and outplantings in Europe, Southeast and East Asia and the Americas. Based on a multigene phylogeny of nine nuclear and four mitochondrial gene regions they were assigned to five of the six known subclades, 2a-c, e and f, of Phytophthora major Clade 2 and the new subclade 2g. The evolutionary history of the Clade appears to have involved the pre-Gondwanan divergence of three extant subclades, 2c, 2e and 2f, all having disjunct natural distributions on separate continents and comprising species with a soilborne and aquatic lifestyle and, in addition, a few partially aerial species in Clade 2c; and the post-Gondwanan evolution of subclades 2a and 2g in Southeast/East Asia and 2b in South America, respectively, from their common ancestor. Species in Clade 2g are soilborne whereas Clade 2b comprises both soil-inhabiting and aerial species. Clade 2a has evolved further towards an aerial lifestyle comprising only species which are predominantly or partially airborne. Based on high nuclear heterozygosity levels ca. 38 % of the taxa in Clades 2a and 2b could be some form of hybrid, and the hybridity may be favoured by an A1/A2 breeding system and an aerial life style. Circumstantial evidence suggests the now 93 described species and informally designated taxa in Clade 2 result from both allopatric non-adaptive and sympatric adaptive radiations. They represent most morphological and physiological characters, breeding systems, lifestyles and forms of host specialism found across the Phytophthora clades as a whole, demonstrating the strong biological cohesiveness of the genus. The finding of 43 previously unknown species from a single Phytophthora clade highlight a critical lack of information on the scale of the unknown pathogen threats to forests and natural ecosystems, underlining the risk of basing plant biosecurity protocols mainly on lists of named organisms. More surveys in natural ecosystems of yet unsurveyed regions in Africa, Asia, Central and South America are needed to unveil the full diversity of the clade and the factors driving diversity, speciation and adaptation in Phytophthora.
T2  - Studies in Mycology
T1  - Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity
EP  - 388
IS  - 107
SP  - 251
DO  - 10.3114/sim.2024.107.04
UR  - conv_1770
ER  - 

@article{
author = "Jung, T. and Milenković, Ivan and Balci, Y. and Janousek, J. and Kudlacek, Tomas and Nagy, Zoltan and Baharuddin, B. and Bakonyi, J. and Broders, Kirk D. and Cacciola, S. O. and Chang, T. -T. and Chi, N. M. and Corcobado, Tamara and Cravador, A. and Đorđević, B. and Duran, A. and Ferreira, M. and Fu, C. -H. and Garcia, L. and Hieno, A. and Ho, H. -H. and Hong, C. and Junaid, M. and Kageyama, K. and Kuswinanti, T. and Maia, C. and Majek, Tomas and Masuya, H. and Lio, G. Magnano di San and Mendieta-Araica, B. and Nasri, N. and Oliveira, L. S. S. and Pane, A. and Perez-Sierra, Ana and Rosmana, A. and von Stowasser, E. Sanfuentes and Scanu, Bruno and Singh, R. and Stanivuković, Zoran and Tarigan, Marthin and Thu, P. Q. and Tomić, Z. and Tomsovsky, M. and Uematsu, Seiji and Webber, Joan and Zeng, H. -C. and Zheng, F. -C. and Brasier, Clive M. and Horta Jung, Marilia",
year = "2024",
abstract = "During 25 surveys of global Phytophthora diversity, conducted between 1998 and 2020, 43 new species were detected in natural ecosystems and, occasionally, in nurseries and outplantings in Europe, Southeast and East Asia and the Americas. Based on a multigene phylogeny of nine nuclear and four mitochondrial gene regions they were assigned to five of the six known subclades, 2a-c, e and f, of Phytophthora major Clade 2 and the new subclade 2g. The evolutionary history of the Clade appears to have involved the pre-Gondwanan divergence of three extant subclades, 2c, 2e and 2f, all having disjunct natural distributions on separate continents and comprising species with a soilborne and aquatic lifestyle and, in addition, a few partially aerial species in Clade 2c; and the post-Gondwanan evolution of subclades 2a and 2g in Southeast/East Asia and 2b in South America, respectively, from their common ancestor. Species in Clade 2g are soilborne whereas Clade 2b comprises both soil-inhabiting and aerial species. Clade 2a has evolved further towards an aerial lifestyle comprising only species which are predominantly or partially airborne. Based on high nuclear heterozygosity levels ca. 38 % of the taxa in Clades 2a and 2b could be some form of hybrid, and the hybridity may be favoured by an A1/A2 breeding system and an aerial life style. Circumstantial evidence suggests the now 93 described species and informally designated taxa in Clade 2 result from both allopatric non-adaptive and sympatric adaptive radiations. They represent most morphological and physiological characters, breeding systems, lifestyles and forms of host specialism found across the Phytophthora clades as a whole, demonstrating the strong biological cohesiveness of the genus. The finding of 43 previously unknown species from a single Phytophthora clade highlight a critical lack of information on the scale of the unknown pathogen threats to forests and natural ecosystems, underlining the risk of basing plant biosecurity protocols mainly on lists of named organisms. More surveys in natural ecosystems of yet unsurveyed regions in Africa, Asia, Central and South America are needed to unveil the full diversity of the clade and the factors driving diversity, speciation and adaptation in Phytophthora.",
journal = "Studies in Mycology",
title = "Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity",
pages = "388-251",
number = "107",
doi = "10.3114/sim.2024.107.04",
url = "conv_1770"
}

Jung, T., Milenković, I., Balci, Y., Janousek, J., Kudlacek, T., Nagy, Z., Baharuddin, B., Bakonyi, J., Broders, K. D., Cacciola, S. O., Chang, T. -T., Chi, N. M., Corcobado, T., Cravador, A., Đorđević, B., Duran, A., Ferreira, M., Fu, C. -H., Garcia, L., Hieno, A., Ho, H. -H., Hong, C., Junaid, M., Kageyama, K., Kuswinanti, T., Maia, C., Majek, T., Masuya, H., Lio, G. M. d. S., Mendieta-Araica, B., Nasri, N., Oliveira, L. S. S., Pane, A., Perez-Sierra, A., Rosmana, A., von Stowasser, E. S., Scanu, B., Singh, R., Stanivuković, Z., Tarigan, M., Thu, P. Q., Tomić, Z., Tomsovsky, M., Uematsu, S., Webber, J., Zeng, H. -C., Zheng, F. -C., Brasier, C. M.,& Horta Jung, M.. (2024). Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity. in Studies in Mycology(107), 251-388.
https://doi.org/10.3114/sim.2024.107.04
conv_1770

Jung T, Milenković I, Balci Y, Janousek J, Kudlacek T, Nagy Z, Baharuddin B, Bakonyi J, Broders KD, Cacciola SO, Chang T-, Chi NM, Corcobado T, Cravador A, Đorđević B, Duran A, Ferreira M, Fu C-, Garcia L, Hieno A, Ho H-, Hong C, Junaid M, Kageyama K, Kuswinanti T, Maia C, Majek T, Masuya H, Lio GMDS, Mendieta-Araica B, Nasri N, Oliveira LSS, Pane A, Perez-Sierra A, Rosmana A, von Stowasser ES, Scanu B, Singh R, Stanivuković Z, Tarigan M, Thu PQ, Tomić Z, Tomsovsky M, Uematsu S, Webber J, Zeng H-, Zheng F-, Brasier CM, Horta Jung M. Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity. in Studies in Mycology. 2024;(107):251-388.
doi:10.3114/sim.2024.107.04
conv_1770 .

Jung, T., Milenković, Ivan, Balci, Y., Janousek, J., Kudlacek, Tomas, Nagy, Zoltan, Baharuddin, B., Bakonyi, J., Broders, Kirk D., Cacciola, S. O., Chang, T. -T., Chi, N. M., Corcobado, Tamara, Cravador, A., Đorđević, B., Duran, A., Ferreira, M., Fu, C. -H., Garcia, L., Hieno, A., Ho, H. -H., Hong, C., Junaid, M., Kageyama, K., Kuswinanti, T., Maia, C., Majek, Tomas, Masuya, H., Lio, G. Magnano di San, Mendieta-Araica, B., Nasri, N., Oliveira, L. S. S., Pane, A., Perez-Sierra, Ana, Rosmana, A., von Stowasser, E. Sanfuentes, Scanu, Bruno, Singh, R., Stanivuković, Zoran, Tarigan, Marthin, Thu, P. Q., Tomić, Z., Tomsovsky, M., Uematsu, Seiji, Webber, Joan, Zeng, H. -C., Zheng, F. -C., Brasier, Clive M., Horta Jung, Marilia, "Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity" in Studies in Mycology, no. 107 (2024):251-388,
https://doi.org/10.3114/sim.2024.107.04 .,
conv_1770 .

TY  - JOUR
AU  - Jung, T.
AU  - Milenković, Ivan
AU  - Corcobado, Tamara
AU  - Majek, Tomas
AU  - Janousek, J.
AU  - Kudlacek, Tomas
AU  - Tomsovsky, M.
AU  - Nagy, Zoltan
AU  - Duran, A.
AU  - Tarigan, Marthin
AU  - von Stowasser, E. Sanfuentes
AU  - Singh, R.
AU  - Ferreira, M.
AU  - Webber, Joan
AU  - Scanu, Bruno
AU  - Chi, N. M.
AU  - Thu, P. Q.
AU  - Junaid, M.
AU  - Rosmana, A.
AU  - Baharuddin, B.
AU  - Kuswinanti, T.
AU  - Nasri, N.
AU  - Kageyama, K.
AU  - Hieno, A.
AU  - Masuya, H.
AU  - Uematsu, Seiji
AU  - Oliva, J.
AU  - Redondo, Miguel A.
AU  - Maia, C.
AU  - Matsiakh, I.
AU  - Kramarets, V.
AU  - O'Hanlon, R.
AU  - Tomić, Z.
AU  - Brasier, Clive M.
AU  - Horta Jung, Marilia
PY  - 2022
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1314
AB  - During extensive surveys of global Phytophthora diversity 14 new species detected in natural ecosystems in Chile, Indonesia, USA (Louisiana), Sweden, Ukraine and Vietnam were assigned to Phytophthora major Clade 10 based on a multigene phylogeny of nine nuclear and three mitochondrial gene regions. Clade 10 now comprises three subclades. Subclades 10a and 10b contain species with nonpapillate sporangia, a range of breeding systems and a mainly soil-and waterborne lifestyle. These include the previously described P. afrocarpa, P. gallica and P. intercalaris and eight of the new species: P. ludoviciana, P. procera, P. pseudogallica, P. scandinavica, P. subarctica, P. tenui- mura, P. tonkinensis and P. ukrainensis. In contrast, all species in Subclade 10c have papillate sporangia and are self-fertile (or homothallic) with an aerial lifestyle including the known P. boehmeriae, P. gondwanensis, P. kernoviae and P. morindae and the new species P. celebensis, P. chilensis, P. javanensis, P. multiglobulosa, P. pseudochilensis and P. pseudokernoviae. All new Phytophthora species differed from each other and from related species by their unique combinations of morphological characters, breeding systems, cardinal temperatures and growth rates. The biogeography and evolutionary history of Clade 10 are discussed. We propose that the three subclades originated via the early divergence of pre-Gondwanan ancestors  gt  175 Mya into water-and soilborne and aerially dispersed lineages and subsequently underwent multiple allopatric and sympatric radiations during their global spread.
T2  - Persoonia
T1  - Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications
EP  - 57
SP  - 1
VL  - 49
DO  - 10.3767/persoonia.2022.49.01
UR  - conv_1684
ER  - 

@article{
author = "Jung, T. and Milenković, Ivan and Corcobado, Tamara and Majek, Tomas and Janousek, J. and Kudlacek, Tomas and Tomsovsky, M. and Nagy, Zoltan and Duran, A. and Tarigan, Marthin and von Stowasser, E. Sanfuentes and Singh, R. and Ferreira, M. and Webber, Joan and Scanu, Bruno and Chi, N. M. and Thu, P. Q. and Junaid, M. and Rosmana, A. and Baharuddin, B. and Kuswinanti, T. and Nasri, N. and Kageyama, K. and Hieno, A. and Masuya, H. and Uematsu, Seiji and Oliva, J. and Redondo, Miguel A. and Maia, C. and Matsiakh, I. and Kramarets, V. and O'Hanlon, R. and Tomić, Z. and Brasier, Clive M. and Horta Jung, Marilia",
year = "2022",
abstract = "During extensive surveys of global Phytophthora diversity 14 new species detected in natural ecosystems in Chile, Indonesia, USA (Louisiana), Sweden, Ukraine and Vietnam were assigned to Phytophthora major Clade 10 based on a multigene phylogeny of nine nuclear and three mitochondrial gene regions. Clade 10 now comprises three subclades. Subclades 10a and 10b contain species with nonpapillate sporangia, a range of breeding systems and a mainly soil-and waterborne lifestyle. These include the previously described P. afrocarpa, P. gallica and P. intercalaris and eight of the new species: P. ludoviciana, P. procera, P. pseudogallica, P. scandinavica, P. subarctica, P. tenui- mura, P. tonkinensis and P. ukrainensis. In contrast, all species in Subclade 10c have papillate sporangia and are self-fertile (or homothallic) with an aerial lifestyle including the known P. boehmeriae, P. gondwanensis, P. kernoviae and P. morindae and the new species P. celebensis, P. chilensis, P. javanensis, P. multiglobulosa, P. pseudochilensis and P. pseudokernoviae. All new Phytophthora species differed from each other and from related species by their unique combinations of morphological characters, breeding systems, cardinal temperatures and growth rates. The biogeography and evolutionary history of Clade 10 are discussed. We propose that the three subclades originated via the early divergence of pre-Gondwanan ancestors  gt  175 Mya into water-and soilborne and aerially dispersed lineages and subsequently underwent multiple allopatric and sympatric radiations during their global spread.",
journal = "Persoonia",
title = "Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications",
pages = "57-1",
volume = "49",
doi = "10.3767/persoonia.2022.49.01",
url = "conv_1684"
}

Jung, T., Milenković, I., Corcobado, T., Majek, T., Janousek, J., Kudlacek, T., Tomsovsky, M., Nagy, Z., Duran, A., Tarigan, M., von Stowasser, E. S., Singh, R., Ferreira, M., Webber, J., Scanu, B., Chi, N. M., Thu, P. Q., Junaid, M., Rosmana, A., Baharuddin, B., Kuswinanti, T., Nasri, N., Kageyama, K., Hieno, A., Masuya, H., Uematsu, S., Oliva, J., Redondo, M. A., Maia, C., Matsiakh, I., Kramarets, V., O'Hanlon, R., Tomić, Z., Brasier, C. M.,& Horta Jung, M.. (2022). Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications. in Persoonia, 49, 1-57.
https://doi.org/10.3767/persoonia.2022.49.01
conv_1684

Jung T, Milenković I, Corcobado T, Majek T, Janousek J, Kudlacek T, Tomsovsky M, Nagy Z, Duran A, Tarigan M, von Stowasser ES, Singh R, Ferreira M, Webber J, Scanu B, Chi NM, Thu PQ, Junaid M, Rosmana A, Baharuddin B, Kuswinanti T, Nasri N, Kageyama K, Hieno A, Masuya H, Uematsu S, Oliva J, Redondo MA, Maia C, Matsiakh I, Kramarets V, O'Hanlon R, Tomić Z, Brasier CM, Horta Jung M. Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications. in Persoonia. 2022;49:1-57.
doi:10.3767/persoonia.2022.49.01
conv_1684 .

Jung, T., Milenković, Ivan, Corcobado, Tamara, Majek, Tomas, Janousek, J., Kudlacek, Tomas, Tomsovsky, M., Nagy, Zoltan, Duran, A., Tarigan, Marthin, von Stowasser, E. Sanfuentes, Singh, R., Ferreira, M., Webber, Joan, Scanu, Bruno, Chi, N. M., Thu, P. Q., Junaid, M., Rosmana, A., Baharuddin, B., Kuswinanti, T., Nasri, N., Kageyama, K., Hieno, A., Masuya, H., Uematsu, Seiji, Oliva, J., Redondo, Miguel A., Maia, C., Matsiakh, I., Kramarets, V., O'Hanlon, R., Tomić, Z., Brasier, Clive M., Horta Jung, Marilia, "Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications" in Persoonia, 49 (2022):1-57,
https://doi.org/10.3767/persoonia.2022.49.01 .,
conv_1684 .