TY  - JOUR
AU  - Plis, Kamila
AU  - Niedzialkowska, Magdalena
AU  - Borowik, Tomasz
AU  - Lang, Johannes
AU  - Heddergott, Mike
AU  - Tiainen, Juha
AU  - Bunevich, Aleksey
AU  - Sprem, Nikica
AU  - Paule, Ladislav
AU  - Danilkin, Aleksey
AU  - Kholodova, Marina
AU  - Zvychaynaya, Elena
AU  - Kashinina, Nadezhda
AU  - Pokorny, Bostjan
AU  - Flajsman, Katarina
AU  - Paulauskas, Algimantas
AU  - Đan, Mihajla
AU  - Ristić, Zoran
AU  - Novak, Lubos
AU  - Kusza, Szilvia
AU  - Miller, Christine
AU  - Tsaparis, Dimitris
AU  - Stoyanov, Stoyan
AU  - Shkvyria, Maryna
AU  - Suchentrunk, Franz
AU  - Kutal, Miroslav
AU  - Lavadinović, Vukan
AU  - Snjegota, Dragana
AU  - Krapal, Ana-Maria
AU  - Danila, Gabriel
AU  - Veeroja, Rauno
AU  - Dulko, Elzbieta
AU  - Jedrzejewska, Bogumila
PY  - 2022
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1292
AB  - The European roe deer (Capreolus capreolus) is one of the most numerous and widespread ungulate species in Europe, which has complicated the assessment of its genetic diversity on a range-wide scale. In this study, we present the mitochondrial DNA control region (mtDNA CR) genetic diversity and population structure of roe deer in Europe based on the analyses of 3010 samples, which were described as European roe deer individuals. Our analyses revealed two main diversity hotspots, namely Eastern and Central Europe. We proposed that these hotspots result from the Siberian roe deer (C.pygargus) mtDNA introgression and the secondary contact of mtDNA clades, respectively. Significantly lower values of genetic diversity (nucleotide and haplotype diversity) were recorded in the peripheral areas of the species' range, including the southernmost parts of the Last Glacial Maximum (LGM) refugial areas. Roe deer population in Europe consists of 2-3 genetic groups according to SAMOVA, and 15-16 clusters identified by GENELAND. The main driver of roe deer population structure in the eastern parts of the continent has been introgression of mtDNA of C. pygargus. Spatial genetic analyses revealed a complex structure of roe deer on a pan-European scale, which presumably results from post-glacial recolonization of the continent from various parts of a large LGM refugial area by different roe deer mtDNA clades and haplogroups.
T2  - Mammalian Biology
T1  - Mitochondrial DNA diversity and the population genetic structure of contemporary roe deer ( Capreolus capreolus ) in Europe
EP  - 1754
IS  - 5-6
SP  - 1743
VL  - 102
DO  - 10.1007/s42991-022-00274-y
UR  - conv_1645
ER  - 

@article{
author = "Plis, Kamila and Niedzialkowska, Magdalena and Borowik, Tomasz and Lang, Johannes and Heddergott, Mike and Tiainen, Juha and Bunevich, Aleksey and Sprem, Nikica and Paule, Ladislav and Danilkin, Aleksey and Kholodova, Marina and Zvychaynaya, Elena and Kashinina, Nadezhda and Pokorny, Bostjan and Flajsman, Katarina and Paulauskas, Algimantas and Đan, Mihajla and Ristić, Zoran and Novak, Lubos and Kusza, Szilvia and Miller, Christine and Tsaparis, Dimitris and Stoyanov, Stoyan and Shkvyria, Maryna and Suchentrunk, Franz and Kutal, Miroslav and Lavadinović, Vukan and Snjegota, Dragana and Krapal, Ana-Maria and Danila, Gabriel and Veeroja, Rauno and Dulko, Elzbieta and Jedrzejewska, Bogumila",
year = "2022",
abstract = "The European roe deer (Capreolus capreolus) is one of the most numerous and widespread ungulate species in Europe, which has complicated the assessment of its genetic diversity on a range-wide scale. In this study, we present the mitochondrial DNA control region (mtDNA CR) genetic diversity and population structure of roe deer in Europe based on the analyses of 3010 samples, which were described as European roe deer individuals. Our analyses revealed two main diversity hotspots, namely Eastern and Central Europe. We proposed that these hotspots result from the Siberian roe deer (C.pygargus) mtDNA introgression and the secondary contact of mtDNA clades, respectively. Significantly lower values of genetic diversity (nucleotide and haplotype diversity) were recorded in the peripheral areas of the species' range, including the southernmost parts of the Last Glacial Maximum (LGM) refugial areas. Roe deer population in Europe consists of 2-3 genetic groups according to SAMOVA, and 15-16 clusters identified by GENELAND. The main driver of roe deer population structure in the eastern parts of the continent has been introgression of mtDNA of C. pygargus. Spatial genetic analyses revealed a complex structure of roe deer on a pan-European scale, which presumably results from post-glacial recolonization of the continent from various parts of a large LGM refugial area by different roe deer mtDNA clades and haplogroups.",
journal = "Mammalian Biology",
title = "Mitochondrial DNA diversity and the population genetic structure of contemporary roe deer ( Capreolus capreolus ) in Europe",
pages = "1754-1743",
number = "5-6",
volume = "102",
doi = "10.1007/s42991-022-00274-y",
url = "conv_1645"
}

Plis, K., Niedzialkowska, M., Borowik, T., Lang, J., Heddergott, M., Tiainen, J., Bunevich, A., Sprem, N., Paule, L., Danilkin, A., Kholodova, M., Zvychaynaya, E., Kashinina, N., Pokorny, B., Flajsman, K., Paulauskas, A., Đan, M., Ristić, Z., Novak, L., Kusza, S., Miller, C., Tsaparis, D., Stoyanov, S., Shkvyria, M., Suchentrunk, F., Kutal, M., Lavadinović, V., Snjegota, D., Krapal, A., Danila, G., Veeroja, R., Dulko, E.,& Jedrzejewska, B.. (2022). Mitochondrial DNA diversity and the population genetic structure of contemporary roe deer ( Capreolus capreolus ) in Europe. in Mammalian Biology, 102(5-6), 1743-1754.
https://doi.org/10.1007/s42991-022-00274-y
conv_1645

Plis K, Niedzialkowska M, Borowik T, Lang J, Heddergott M, Tiainen J, Bunevich A, Sprem N, Paule L, Danilkin A, Kholodova M, Zvychaynaya E, Kashinina N, Pokorny B, Flajsman K, Paulauskas A, Đan M, Ristić Z, Novak L, Kusza S, Miller C, Tsaparis D, Stoyanov S, Shkvyria M, Suchentrunk F, Kutal M, Lavadinović V, Snjegota D, Krapal A, Danila G, Veeroja R, Dulko E, Jedrzejewska B. Mitochondrial DNA diversity and the population genetic structure of contemporary roe deer ( Capreolus capreolus ) in Europe. in Mammalian Biology. 2022;102(5-6):1743-1754.
doi:10.1007/s42991-022-00274-y
conv_1645 .

Plis, Kamila, Niedzialkowska, Magdalena, Borowik, Tomasz, Lang, Johannes, Heddergott, Mike, Tiainen, Juha, Bunevich, Aleksey, Sprem, Nikica, Paule, Ladislav, Danilkin, Aleksey, Kholodova, Marina, Zvychaynaya, Elena, Kashinina, Nadezhda, Pokorny, Bostjan, Flajsman, Katarina, Paulauskas, Algimantas, Đan, Mihajla, Ristić, Zoran, Novak, Lubos, Kusza, Szilvia, Miller, Christine, Tsaparis, Dimitris, Stoyanov, Stoyan, Shkvyria, Maryna, Suchentrunk, Franz, Kutal, Miroslav, Lavadinović, Vukan, Snjegota, Dragana, Krapal, Ana-Maria, Danila, Gabriel, Veeroja, Rauno, Dulko, Elzbieta, Jedrzejewska, Bogumila, "Mitochondrial DNA diversity and the population genetic structure of contemporary roe deer ( Capreolus capreolus ) in Europe" in Mammalian Biology, 102, no. 5-6 (2022):1743-1754,
https://doi.org/10.1007/s42991-022-00274-y .,
conv_1645 .

TY  - JOUR
AU  - Plis, Kamila
AU  - Niedzialkowska, Magdalena
AU  - Borowik, Tomasz
AU  - Lang, Johannes
AU  - Heddergott, Mike
AU  - Tiainen, Juha
AU  - Bunevich, Aleksey
AU  - Sprem, Nikica
AU  - Paule, Ladislav
AU  - Danilkin, Aleksey
AU  - Kholodova, Marina
AU  - Zvychaynaya, Elena
AU  - Kashinina, Nadezhda
AU  - Pokorny, Bostjan
AU  - Flajsman, Katarina
AU  - Paulauskas, Algimantas
AU  - Đan, Mihajla
AU  - Ristić, Zoran
AU  - Novak, Lubos
AU  - Kusza, Szilvia
AU  - Miller, Christine
AU  - Tsaparis, Dimitris
AU  - Stoyanov, Stoyan
AU  - Shkvyria, Maryna
AU  - Suchentrunk, Franz
AU  - Kutal, Miroslav
AU  - Lavadinović, Vukan
AU  - Snjegota, Dragana
AU  - Krapal, Ana-Maria
AU  - Danila, Gabriel
AU  - Veeroja, Rauno
AU  - Dulko, Elzbieta
AU  - Jedrzejewska, Bogumila
PY  - 2022
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1361
AB  - To provide the most comprehensive picture of species phylogeny and phylogeography of European roe deer (Capreolus capreolus), we analyzed mtDNA control region (610 bp) of 1469 samples of roe deer from Central and Eastern Europe and included into the analyses additional 1541 mtDNA sequences from GenBank from other regions of the continent. We detected two mtDNA lineages of the species: European and Siberian (an introgression of C. pygargus mtDNA into C. capreolus). The Siberian lineage was most frequent in the eastern part of the continent and declined toward Central Europe. The European lineage contained three clades (Central, Eastern, and Western) composed of several haplogroups, many of which were separated in space. The Western clade appeared to have a discontinuous range from Portugal to Russia. Most of the haplogroups in the Central and the Eastern clades were under expansion during the Weichselian glacial period before the Last Glacial Maximum (LGM), while the expansion time of the Western clade overlapped with the Eemian interglacial. The high genetic diversity of extant roe deer is the result of their survival during the LGM probably in a large, contiguous range spanning from the Iberian Peninsula to the Caucasus Mts and in two northern refugia.
T2  - Ecology and Evolution
T1  - Pan-European phylogeography of the European roe deer ( Capreolus capreolus )
IS  - 5
VL  - 12
DO  - 10.1002/ece3.8931
UR  - conv_1637
ER  - 

@article{
author = "Plis, Kamila and Niedzialkowska, Magdalena and Borowik, Tomasz and Lang, Johannes and Heddergott, Mike and Tiainen, Juha and Bunevich, Aleksey and Sprem, Nikica and Paule, Ladislav and Danilkin, Aleksey and Kholodova, Marina and Zvychaynaya, Elena and Kashinina, Nadezhda and Pokorny, Bostjan and Flajsman, Katarina and Paulauskas, Algimantas and Đan, Mihajla and Ristić, Zoran and Novak, Lubos and Kusza, Szilvia and Miller, Christine and Tsaparis, Dimitris and Stoyanov, Stoyan and Shkvyria, Maryna and Suchentrunk, Franz and Kutal, Miroslav and Lavadinović, Vukan and Snjegota, Dragana and Krapal, Ana-Maria and Danila, Gabriel and Veeroja, Rauno and Dulko, Elzbieta and Jedrzejewska, Bogumila",
year = "2022",
abstract = "To provide the most comprehensive picture of species phylogeny and phylogeography of European roe deer (Capreolus capreolus), we analyzed mtDNA control region (610 bp) of 1469 samples of roe deer from Central and Eastern Europe and included into the analyses additional 1541 mtDNA sequences from GenBank from other regions of the continent. We detected two mtDNA lineages of the species: European and Siberian (an introgression of C. pygargus mtDNA into C. capreolus). The Siberian lineage was most frequent in the eastern part of the continent and declined toward Central Europe. The European lineage contained three clades (Central, Eastern, and Western) composed of several haplogroups, many of which were separated in space. The Western clade appeared to have a discontinuous range from Portugal to Russia. Most of the haplogroups in the Central and the Eastern clades were under expansion during the Weichselian glacial period before the Last Glacial Maximum (LGM), while the expansion time of the Western clade overlapped with the Eemian interglacial. The high genetic diversity of extant roe deer is the result of their survival during the LGM probably in a large, contiguous range spanning from the Iberian Peninsula to the Caucasus Mts and in two northern refugia.",
journal = "Ecology and Evolution",
title = "Pan-European phylogeography of the European roe deer ( Capreolus capreolus )",
number = "5",
volume = "12",
doi = "10.1002/ece3.8931",
url = "conv_1637"
}

Plis, K., Niedzialkowska, M., Borowik, T., Lang, J., Heddergott, M., Tiainen, J., Bunevich, A., Sprem, N., Paule, L., Danilkin, A., Kholodova, M., Zvychaynaya, E., Kashinina, N., Pokorny, B., Flajsman, K., Paulauskas, A., Đan, M., Ristić, Z., Novak, L., Kusza, S., Miller, C., Tsaparis, D., Stoyanov, S., Shkvyria, M., Suchentrunk, F., Kutal, M., Lavadinović, V., Snjegota, D., Krapal, A., Danila, G., Veeroja, R., Dulko, E.,& Jedrzejewska, B.. (2022). Pan-European phylogeography of the European roe deer ( Capreolus capreolus ). in Ecology and Evolution, 12(5).
https://doi.org/10.1002/ece3.8931
conv_1637

Plis K, Niedzialkowska M, Borowik T, Lang J, Heddergott M, Tiainen J, Bunevich A, Sprem N, Paule L, Danilkin A, Kholodova M, Zvychaynaya E, Kashinina N, Pokorny B, Flajsman K, Paulauskas A, Đan M, Ristić Z, Novak L, Kusza S, Miller C, Tsaparis D, Stoyanov S, Shkvyria M, Suchentrunk F, Kutal M, Lavadinović V, Snjegota D, Krapal A, Danila G, Veeroja R, Dulko E, Jedrzejewska B. Pan-European phylogeography of the European roe deer ( Capreolus capreolus ). in Ecology and Evolution. 2022;12(5).
doi:10.1002/ece3.8931
conv_1637 .

Plis, Kamila, Niedzialkowska, Magdalena, Borowik, Tomasz, Lang, Johannes, Heddergott, Mike, Tiainen, Juha, Bunevich, Aleksey, Sprem, Nikica, Paule, Ladislav, Danilkin, Aleksey, Kholodova, Marina, Zvychaynaya, Elena, Kashinina, Nadezhda, Pokorny, Bostjan, Flajsman, Katarina, Paulauskas, Algimantas, Đan, Mihajla, Ristić, Zoran, Novak, Lubos, Kusza, Szilvia, Miller, Christine, Tsaparis, Dimitris, Stoyanov, Stoyan, Shkvyria, Maryna, Suchentrunk, Franz, Kutal, Miroslav, Lavadinović, Vukan, Snjegota, Dragana, Krapal, Ana-Maria, Danila, Gabriel, Veeroja, Rauno, Dulko, Elzbieta, Jedrzejewska, Bogumila, "Pan-European phylogeography of the European roe deer ( Capreolus capreolus )" in Ecology and Evolution, 12, no. 5 (2022),
https://doi.org/10.1002/ece3.8931 .,
conv_1637 .