TY  - JOUR
AU  - Caballol, Maria
AU  - Redondo, Miguel A.
AU  - Catalan, Nuria
AU  - Corcobado, Tamara
AU  - Jung, Thomas
AU  - Marcais, Benoit
AU  - Milenković, Ivan
AU  - Nemesio-Gorriz, Miguel
AU  - Stenlid, Jan
AU  - Oliva, Jonas
PY  - 2024
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1517
AB  - Climate shapes the distribution of plant-associated microbes such as mycorrhizal and endophytic fungi. However, the role of climate in plant pathogen community assembly is less understood. Here, we explored the role of climate in the assembly of Phytophthora communities at  gt 250 sites along a latitudinal gradient from Spain to northern Sweden and an altitudinal gradient from the Spanish Pyrenees to lowland areas. Communities were detected by ITS sequencing of river filtrates. Mediation analysis supported the role of climate in the biogeography of Phytophthora and ruled out other environmental factors such as geography or tree diversity. Comparisons of functional and species diversity showed that environmental filtering dominated over competitive exclusion in Europe. Temperature and precipitation acted as environmental filters at different extremes of the gradients. In northern regions, winter temperatures acted as an environmental filter on Phytophthora community assembly, selecting species adapted to survive low minimum temperatures. In southern latitudes, a hot dry climate was the main environmental filter, resulting in communities dominated by drought-tolerant Phytophthora species with thick oospore walls, a high optimum temperature for growth, and a high maximum temperature limit for growth. By taking a community ecology approach, we show that the establishment of Phytophthora plant pathogens in Europe is mainly restricted by cold temperatures.
T2  - ISME Journal
T1  - Climate acts as an environmental filter to plant pathogens
IS  - 1
VL  - 18
DO  - 10.1093/ismejo/wrae010
UR  - conv_1787
ER  - 

@article{
author = "Caballol, Maria and Redondo, Miguel A. and Catalan, Nuria and Corcobado, Tamara and Jung, Thomas and Marcais, Benoit and Milenković, Ivan and Nemesio-Gorriz, Miguel and Stenlid, Jan and Oliva, Jonas",
year = "2024",
abstract = "Climate shapes the distribution of plant-associated microbes such as mycorrhizal and endophytic fungi. However, the role of climate in plant pathogen community assembly is less understood. Here, we explored the role of climate in the assembly of Phytophthora communities at  gt 250 sites along a latitudinal gradient from Spain to northern Sweden and an altitudinal gradient from the Spanish Pyrenees to lowland areas. Communities were detected by ITS sequencing of river filtrates. Mediation analysis supported the role of climate in the biogeography of Phytophthora and ruled out other environmental factors such as geography or tree diversity. Comparisons of functional and species diversity showed that environmental filtering dominated over competitive exclusion in Europe. Temperature and precipitation acted as environmental filters at different extremes of the gradients. In northern regions, winter temperatures acted as an environmental filter on Phytophthora community assembly, selecting species adapted to survive low minimum temperatures. In southern latitudes, a hot dry climate was the main environmental filter, resulting in communities dominated by drought-tolerant Phytophthora species with thick oospore walls, a high optimum temperature for growth, and a high maximum temperature limit for growth. By taking a community ecology approach, we show that the establishment of Phytophthora plant pathogens in Europe is mainly restricted by cold temperatures.",
journal = "ISME Journal",
title = "Climate acts as an environmental filter to plant pathogens",
number = "1",
volume = "18",
doi = "10.1093/ismejo/wrae010",
url = "conv_1787"
}

Caballol, M., Redondo, M. A., Catalan, N., Corcobado, T., Jung, T., Marcais, B., Milenković, I., Nemesio-Gorriz, M., Stenlid, J.,& Oliva, J.. (2024). Climate acts as an environmental filter to plant pathogens. in ISME Journal, 18(1).
https://doi.org/10.1093/ismejo/wrae010
conv_1787

Caballol M, Redondo MA, Catalan N, Corcobado T, Jung T, Marcais B, Milenković I, Nemesio-Gorriz M, Stenlid J, Oliva J. Climate acts as an environmental filter to plant pathogens. in ISME Journal. 2024;18(1).
doi:10.1093/ismejo/wrae010
conv_1787 .

Caballol, Maria, Redondo, Miguel A., Catalan, Nuria, Corcobado, Tamara, Jung, Thomas, Marcais, Benoit, Milenković, Ivan, Nemesio-Gorriz, Miguel, Stenlid, Jan, Oliva, Jonas, "Climate acts as an environmental filter to plant pathogens" in ISME Journal, 18, no. 1 (2024),
https://doi.org/10.1093/ismejo/wrae010 .,
conv_1787 .

TY  - JOUR
AU  - Mullett, Martin S.
AU  - Harris, Anna R.
AU  - Scanu, Bruno
AU  - Van Poucke, Kris
AU  - Leboldus, Jared
AU  - Stamm, Elizabeth
AU  - Bourret, Tyler B.
AU  - Christova, Petya K.
AU  - Oliva, Jonas
AU  - Redondo, Miguel A.
AU  - Talgo, Venche
AU  - Corcobado, Tamara
AU  - Milenković, Ivan
AU  - Horta Jung, Marilia
AU  - Webber, Joan
AU  - Heungens, Kurt
AU  - Jung, Thomas
PY  - 2024
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1496
AB  - Phytophthora pseudosyringae is a self-fertile pathogen of woody plants, particularly associated with tree species from the genera Fagus, Notholithocarpus, Nothofagus and Quercus, which is found across Europe and in parts of North America and Chile. It can behave as a soil pathogen infecting roots and the stem collar region, as well as an aerial pathogen infecting leaves, twigs and stem barks, causing particular damage in the United Kingdom and western North America. The population structure, migration and potential outcrossing of a worldwide collection of isolates were investigated using genotyping-by-sequencing. Coalescent-based migration analysis revealed that the North American population originated from Europe. Historical gene flow has occurred between the continents in both directions to some extent, yet contemporary migration is overwhelmingly from Europe to North America. Two broad population clusters dominate the global population of the pathogen, with a subgroup derived from one of the main clusters found only in western North America. Index of association and network analyses indicate an influential level of outcrossing has occurred in this preferentially inbreeding, homothallic oomycete. Outcrossing between the two main population clusters has created distinct subgroups of admixed individuals that are, however, less common than the main population clusters. Differences in life history traits between the two main population clusters should be further investigated together with virulence and host range tests to evaluate the risk each population poses to natural environments worldwide.
T2  - Molecular Plant Pathology
T1  - Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae
IS  - 4
VL  - 25
DO  - 10.1111/mpp.13450
UR  - conv_1780
ER  - 

@article{
author = "Mullett, Martin S. and Harris, Anna R. and Scanu, Bruno and Van Poucke, Kris and Leboldus, Jared and Stamm, Elizabeth and Bourret, Tyler B. and Christova, Petya K. and Oliva, Jonas and Redondo, Miguel A. and Talgo, Venche and Corcobado, Tamara and Milenković, Ivan and Horta Jung, Marilia and Webber, Joan and Heungens, Kurt and Jung, Thomas",
year = "2024",
abstract = "Phytophthora pseudosyringae is a self-fertile pathogen of woody plants, particularly associated with tree species from the genera Fagus, Notholithocarpus, Nothofagus and Quercus, which is found across Europe and in parts of North America and Chile. It can behave as a soil pathogen infecting roots and the stem collar region, as well as an aerial pathogen infecting leaves, twigs and stem barks, causing particular damage in the United Kingdom and western North America. The population structure, migration and potential outcrossing of a worldwide collection of isolates were investigated using genotyping-by-sequencing. Coalescent-based migration analysis revealed that the North American population originated from Europe. Historical gene flow has occurred between the continents in both directions to some extent, yet contemporary migration is overwhelmingly from Europe to North America. Two broad population clusters dominate the global population of the pathogen, with a subgroup derived from one of the main clusters found only in western North America. Index of association and network analyses indicate an influential level of outcrossing has occurred in this preferentially inbreeding, homothallic oomycete. Outcrossing between the two main population clusters has created distinct subgroups of admixed individuals that are, however, less common than the main population clusters. Differences in life history traits between the two main population clusters should be further investigated together with virulence and host range tests to evaluate the risk each population poses to natural environments worldwide.",
journal = "Molecular Plant Pathology",
title = "Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae",
number = "4",
volume = "25",
doi = "10.1111/mpp.13450",
url = "conv_1780"
}

Mullett, M. S., Harris, A. R., Scanu, B., Van Poucke, K., Leboldus, J., Stamm, E., Bourret, T. B., Christova, P. K., Oliva, J., Redondo, M. A., Talgo, V., Corcobado, T., Milenković, I., Horta Jung, M., Webber, J., Heungens, K.,& Jung, T.. (2024). Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae. in Molecular Plant Pathology, 25(4).
https://doi.org/10.1111/mpp.13450
conv_1780

Mullett MS, Harris AR, Scanu B, Van Poucke K, Leboldus J, Stamm E, Bourret TB, Christova PK, Oliva J, Redondo MA, Talgo V, Corcobado T, Milenković I, Horta Jung M, Webber J, Heungens K, Jung T. Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae. in Molecular Plant Pathology. 2024;25(4).
doi:10.1111/mpp.13450
conv_1780 .

Mullett, Martin S., Harris, Anna R., Scanu, Bruno, Van Poucke, Kris, Leboldus, Jared, Stamm, Elizabeth, Bourret, Tyler B., Christova, Petya K., Oliva, Jonas, Redondo, Miguel A., Talgo, Venche, Corcobado, Tamara, Milenković, Ivan, Horta Jung, Marilia, Webber, Joan, Heungens, Kurt, Jung, Thomas, "Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae" in Molecular Plant Pathology, 25, no. 4 (2024),
https://doi.org/10.1111/mpp.13450 .,
conv_1780 .

TY  - JOUR
AU  - Jung, T.
AU  - Milenković, Ivan
AU  - Corcobado, Tamara
AU  - Majek, Tomas
AU  - Janousek, J.
AU  - Kudlacek, Tomas
AU  - Tomsovsky, M.
AU  - Nagy, Zoltan
AU  - Duran, A.
AU  - Tarigan, Marthin
AU  - von Stowasser, E. Sanfuentes
AU  - Singh, R.
AU  - Ferreira, M.
AU  - Webber, Joan
AU  - Scanu, Bruno
AU  - Chi, N. M.
AU  - Thu, P. Q.
AU  - Junaid, M.
AU  - Rosmana, A.
AU  - Baharuddin, B.
AU  - Kuswinanti, T.
AU  - Nasri, N.
AU  - Kageyama, K.
AU  - Hieno, A.
AU  - Masuya, H.
AU  - Uematsu, Seiji
AU  - Oliva, J.
AU  - Redondo, Miguel A.
AU  - Maia, C.
AU  - Matsiakh, I.
AU  - Kramarets, V.
AU  - O'Hanlon, R.
AU  - Tomić, Z.
AU  - Brasier, Clive M.
AU  - Horta Jung, Marilia
PY  - 2022
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1314
AB  - During extensive surveys of global Phytophthora diversity 14 new species detected in natural ecosystems in Chile, Indonesia, USA (Louisiana), Sweden, Ukraine and Vietnam were assigned to Phytophthora major Clade 10 based on a multigene phylogeny of nine nuclear and three mitochondrial gene regions. Clade 10 now comprises three subclades. Subclades 10a and 10b contain species with nonpapillate sporangia, a range of breeding systems and a mainly soil-and waterborne lifestyle. These include the previously described P. afrocarpa, P. gallica and P. intercalaris and eight of the new species: P. ludoviciana, P. procera, P. pseudogallica, P. scandinavica, P. subarctica, P. tenui- mura, P. tonkinensis and P. ukrainensis. In contrast, all species in Subclade 10c have papillate sporangia and are self-fertile (or homothallic) with an aerial lifestyle including the known P. boehmeriae, P. gondwanensis, P. kernoviae and P. morindae and the new species P. celebensis, P. chilensis, P. javanensis, P. multiglobulosa, P. pseudochilensis and P. pseudokernoviae. All new Phytophthora species differed from each other and from related species by their unique combinations of morphological characters, breeding systems, cardinal temperatures and growth rates. The biogeography and evolutionary history of Clade 10 are discussed. We propose that the three subclades originated via the early divergence of pre-Gondwanan ancestors  gt  175 Mya into water-and soilborne and aerially dispersed lineages and subsequently underwent multiple allopatric and sympatric radiations during their global spread.
T2  - Persoonia
T1  - Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications
EP  - 57
SP  - 1
VL  - 49
DO  - 10.3767/persoonia.2022.49.01
UR  - conv_1684
ER  - 

@article{
author = "Jung, T. and Milenković, Ivan and Corcobado, Tamara and Majek, Tomas and Janousek, J. and Kudlacek, Tomas and Tomsovsky, M. and Nagy, Zoltan and Duran, A. and Tarigan, Marthin and von Stowasser, E. Sanfuentes and Singh, R. and Ferreira, M. and Webber, Joan and Scanu, Bruno and Chi, N. M. and Thu, P. Q. and Junaid, M. and Rosmana, A. and Baharuddin, B. and Kuswinanti, T. and Nasri, N. and Kageyama, K. and Hieno, A. and Masuya, H. and Uematsu, Seiji and Oliva, J. and Redondo, Miguel A. and Maia, C. and Matsiakh, I. and Kramarets, V. and O'Hanlon, R. and Tomić, Z. and Brasier, Clive M. and Horta Jung, Marilia",
year = "2022",
abstract = "During extensive surveys of global Phytophthora diversity 14 new species detected in natural ecosystems in Chile, Indonesia, USA (Louisiana), Sweden, Ukraine and Vietnam were assigned to Phytophthora major Clade 10 based on a multigene phylogeny of nine nuclear and three mitochondrial gene regions. Clade 10 now comprises three subclades. Subclades 10a and 10b contain species with nonpapillate sporangia, a range of breeding systems and a mainly soil-and waterborne lifestyle. These include the previously described P. afrocarpa, P. gallica and P. intercalaris and eight of the new species: P. ludoviciana, P. procera, P. pseudogallica, P. scandinavica, P. subarctica, P. tenui- mura, P. tonkinensis and P. ukrainensis. In contrast, all species in Subclade 10c have papillate sporangia and are self-fertile (or homothallic) with an aerial lifestyle including the known P. boehmeriae, P. gondwanensis, P. kernoviae and P. morindae and the new species P. celebensis, P. chilensis, P. javanensis, P. multiglobulosa, P. pseudochilensis and P. pseudokernoviae. All new Phytophthora species differed from each other and from related species by their unique combinations of morphological characters, breeding systems, cardinal temperatures and growth rates. The biogeography and evolutionary history of Clade 10 are discussed. We propose that the three subclades originated via the early divergence of pre-Gondwanan ancestors  gt  175 Mya into water-and soilborne and aerially dispersed lineages and subsequently underwent multiple allopatric and sympatric radiations during their global spread.",
journal = "Persoonia",
title = "Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications",
pages = "57-1",
volume = "49",
doi = "10.3767/persoonia.2022.49.01",
url = "conv_1684"
}

Jung, T., Milenković, I., Corcobado, T., Majek, T., Janousek, J., Kudlacek, T., Tomsovsky, M., Nagy, Z., Duran, A., Tarigan, M., von Stowasser, E. S., Singh, R., Ferreira, M., Webber, J., Scanu, B., Chi, N. M., Thu, P. Q., Junaid, M., Rosmana, A., Baharuddin, B., Kuswinanti, T., Nasri, N., Kageyama, K., Hieno, A., Masuya, H., Uematsu, S., Oliva, J., Redondo, M. A., Maia, C., Matsiakh, I., Kramarets, V., O'Hanlon, R., Tomić, Z., Brasier, C. M.,& Horta Jung, M.. (2022). Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications. in Persoonia, 49, 1-57.
https://doi.org/10.3767/persoonia.2022.49.01
conv_1684

Jung T, Milenković I, Corcobado T, Majek T, Janousek J, Kudlacek T, Tomsovsky M, Nagy Z, Duran A, Tarigan M, von Stowasser ES, Singh R, Ferreira M, Webber J, Scanu B, Chi NM, Thu PQ, Junaid M, Rosmana A, Baharuddin B, Kuswinanti T, Nasri N, Kageyama K, Hieno A, Masuya H, Uematsu S, Oliva J, Redondo MA, Maia C, Matsiakh I, Kramarets V, O'Hanlon R, Tomić Z, Brasier CM, Horta Jung M. Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications. in Persoonia. 2022;49:1-57.
doi:10.3767/persoonia.2022.49.01
conv_1684 .

Jung, T., Milenković, Ivan, Corcobado, Tamara, Majek, Tomas, Janousek, J., Kudlacek, Tomas, Tomsovsky, M., Nagy, Zoltan, Duran, A., Tarigan, Marthin, von Stowasser, E. Sanfuentes, Singh, R., Ferreira, M., Webber, Joan, Scanu, Bruno, Chi, N. M., Thu, P. Q., Junaid, M., Rosmana, A., Baharuddin, B., Kuswinanti, T., Nasri, N., Kageyama, K., Hieno, A., Masuya, H., Uematsu, Seiji, Oliva, J., Redondo, Miguel A., Maia, C., Matsiakh, I., Kramarets, V., O'Hanlon, R., Tomić, Z., Brasier, Clive M., Horta Jung, Marilia, "Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications" in Persoonia, 49 (2022):1-57,
https://doi.org/10.3767/persoonia.2022.49.01 .,
conv_1684 .