TY  - JOUR
AU  - Machacova, Marketa
AU  - Tomaskova, Ivana
AU  - Corcobado, Tamara
AU  - Nagy, Zoltan
AU  - Milanović, Slobodan
AU  - Janousek, Josef
AU  - Peskova, Vitezslava
AU  - Cepl, Jaroslav
AU  - Gezan, Salvador
AU  - Nakladal, Oto
AU  - Zumr, Vaclav
AU  - Kalyniukova, Alina
AU  - Milenković, Ivan
AU  - Jung, Thomas
PY  - 2024
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1522
AB  - Introduction: Mortality of the riparian alder population caused by Phytophthora pathogens has been studied for over 20 years throughout Europe, recently gaining more importance in the context of evident climate change. The main objective of this study was to examine the pathogenicity of species from the "Phytophthora alni complex" present in the Czech Republic (P. x alni and P. uniformis) and P. plurivora to Alnus glutinosa seedlings grown at ambient and elevated CO2 concentration. Methods: An underbark inoculation test was performed with seedlings grown from seeds collected from two Czech alder populations, one suffering from severe Phytophthora decline and the other disease-free. Results: The results showed significant differences in lesion development and seedling mortality. After a 13-week experimental period, at both CO2 levels P. x alni and P. uniformis showed high aggressiveness to A. glutinosa seedlings causing lesions of variable sizes and mortality of 33.3%, and 45.8% of plants, respectively. In contrast, P. plurivora did not cause mortality to any plant, and lesion sizes did not differ significantly from those in control plants. Physiological measurements did not reveal any significant differences between Phytophthora species except for plants inoculated with P. plurivora showing increased values in specific physiological parameters 4 weeks post-inoculation. Net photosynthesis decreased over the measurement period in all treatments with significant differences found between measurements conducted 2 and 4 weeks after the inoculation. Transpiration showed a decreasing trend in all inoculated plants with no significant differences between Phytophthora species at both CO2 levels. Chemical analyses of root samples showed high variability in sugars and phenolic compounds related to the plant's health status. Discussion: This is the first study to examine the response of alder seedlings to Phytophthora pathogens at different CO2 levels. The findings demonstrate high aggressiveness of P. x alni and P. uniformis and weaker aggressiveness of P. plurivora to alder seedlings regardless of the CO2 level.
T2  - Frontiers in Forests and Global Change
T1  - Response of Alnus glutinosa to Phytophthora bark infections at ambient and elevated CO 2 levels
VL  - 7
DO  - 10.3389/ffgc.2024.1379791
UR  - conv_1782
ER  - 

@article{
author = "Machacova, Marketa and Tomaskova, Ivana and Corcobado, Tamara and Nagy, Zoltan and Milanović, Slobodan and Janousek, Josef and Peskova, Vitezslava and Cepl, Jaroslav and Gezan, Salvador and Nakladal, Oto and Zumr, Vaclav and Kalyniukova, Alina and Milenković, Ivan and Jung, Thomas",
year = "2024",
abstract = "Introduction: Mortality of the riparian alder population caused by Phytophthora pathogens has been studied for over 20 years throughout Europe, recently gaining more importance in the context of evident climate change. The main objective of this study was to examine the pathogenicity of species from the "Phytophthora alni complex" present in the Czech Republic (P. x alni and P. uniformis) and P. plurivora to Alnus glutinosa seedlings grown at ambient and elevated CO2 concentration. Methods: An underbark inoculation test was performed with seedlings grown from seeds collected from two Czech alder populations, one suffering from severe Phytophthora decline and the other disease-free. Results: The results showed significant differences in lesion development and seedling mortality. After a 13-week experimental period, at both CO2 levels P. x alni and P. uniformis showed high aggressiveness to A. glutinosa seedlings causing lesions of variable sizes and mortality of 33.3%, and 45.8% of plants, respectively. In contrast, P. plurivora did not cause mortality to any plant, and lesion sizes did not differ significantly from those in control plants. Physiological measurements did not reveal any significant differences between Phytophthora species except for plants inoculated with P. plurivora showing increased values in specific physiological parameters 4 weeks post-inoculation. Net photosynthesis decreased over the measurement period in all treatments with significant differences found between measurements conducted 2 and 4 weeks after the inoculation. Transpiration showed a decreasing trend in all inoculated plants with no significant differences between Phytophthora species at both CO2 levels. Chemical analyses of root samples showed high variability in sugars and phenolic compounds related to the plant's health status. Discussion: This is the first study to examine the response of alder seedlings to Phytophthora pathogens at different CO2 levels. The findings demonstrate high aggressiveness of P. x alni and P. uniformis and weaker aggressiveness of P. plurivora to alder seedlings regardless of the CO2 level.",
journal = "Frontiers in Forests and Global Change",
title = "Response of Alnus glutinosa to Phytophthora bark infections at ambient and elevated CO 2 levels",
volume = "7",
doi = "10.3389/ffgc.2024.1379791",
url = "conv_1782"
}

Machacova, M., Tomaskova, I., Corcobado, T., Nagy, Z., Milanović, S., Janousek, J., Peskova, V., Cepl, J., Gezan, S., Nakladal, O., Zumr, V., Kalyniukova, A., Milenković, I.,& Jung, T.. (2024). Response of Alnus glutinosa to Phytophthora bark infections at ambient and elevated CO 2 levels. in Frontiers in Forests and Global Change, 7.
https://doi.org/10.3389/ffgc.2024.1379791
conv_1782

Machacova M, Tomaskova I, Corcobado T, Nagy Z, Milanović S, Janousek J, Peskova V, Cepl J, Gezan S, Nakladal O, Zumr V, Kalyniukova A, Milenković I, Jung T. Response of Alnus glutinosa to Phytophthora bark infections at ambient and elevated CO 2 levels. in Frontiers in Forests and Global Change. 2024;7.
doi:10.3389/ffgc.2024.1379791
conv_1782 .

Machacova, Marketa, Tomaskova, Ivana, Corcobado, Tamara, Nagy, Zoltan, Milanović, Slobodan, Janousek, Josef, Peskova, Vitezslava, Cepl, Jaroslav, Gezan, Salvador, Nakladal, Oto, Zumr, Vaclav, Kalyniukova, Alina, Milenković, Ivan, Jung, Thomas, "Response of Alnus glutinosa to Phytophthora bark infections at ambient and elevated CO 2 levels" in Frontiers in Forests and Global Change, 7 (2024),
https://doi.org/10.3389/ffgc.2024.1379791 .,
conv_1782 .

TY  - JOUR
AU  - Bacova, Aneta
AU  - Cooke, David E. L.
AU  - Milenković, Ivan
AU  - Majek, Tomas
AU  - Nagy, Zoltan
AU  - Corcobado, Tamara
AU  - Randall, Eva
AU  - Keillor, Beatrix
AU  - Cock, Peter J. A.
AU  - Horta Jung, Marilia
AU  - Jung, Thomas
AU  - Tomsovsky, Michal
PY  - 2024
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1466
AB  - Phytophthora diversity was examined in eight forest and ornamental nurseries in the Czech Republic. A leaf baiting isolation technique and, in two nurseries, also Illumina DNA metabarcoding were used to reveal the diversity of Phytophthora in soil and irrigation water and compare the efficacy of both approaches. In total, baiting revealed the occurrence of 12 Phytophthora taxa in 59.4% of soil samples from seven (87.5%) nurseries. Additional baiting of compost was carried out in two nurseries and two Phytophthora species were recovered. Irrigation water was examined in three nurseries by baiting or by direct isolation from partially decomposed floating leaves collected from the water source, and two Phytophthora species were obtained. Illumina sequencing of soil and water samples was done in two and one nurseries, respectively. Phytophthora reads were identified as 45 Phytophthora taxa, 15 of them previously unknown taxa from Clades 6, 7, 8 and 9. Another 11 taxa belonged to known or undescribed species of the oomycete genera Globisporangium, Hyaloperonospora, Nothophytophthora, Peronospora and Plasmopara. Overall, with both techniques 50 Phytophthora taxa were detected with five taxa (P. taxon organica, P. plurivora, P. rosacearum, P. syringae and P. transitoria) being exclusively detected by baiting and 38 only by DNA metabarcoding. Particularly common records in DNA barcoding were P. cinnamomi and P. lateralis which were not isolated by baiting. Only seven species were detected by both techniques. It is recommended to use the combination of both techniques to determine true diversity of Phytophthora in managed or natural ecosystems and reveal the presence of rare or unknown Phytophthora taxa.
T2  - European Journal of Plant Pathology
T1  - Hidden Phytophthora diversity unveiled in tree nurseries of the Czech Republic with traditional and metabarcoding techniques
EP  - 156
IS  - 1
SP  - 131
VL  - 170
DO  - 10.1007/s10658-024-02886-1
UR  - conv_1791
ER  - 

@article{
author = "Bacova, Aneta and Cooke, David E. L. and Milenković, Ivan and Majek, Tomas and Nagy, Zoltan and Corcobado, Tamara and Randall, Eva and Keillor, Beatrix and Cock, Peter J. A. and Horta Jung, Marilia and Jung, Thomas and Tomsovsky, Michal",
year = "2024",
abstract = "Phytophthora diversity was examined in eight forest and ornamental nurseries in the Czech Republic. A leaf baiting isolation technique and, in two nurseries, also Illumina DNA metabarcoding were used to reveal the diversity of Phytophthora in soil and irrigation water and compare the efficacy of both approaches. In total, baiting revealed the occurrence of 12 Phytophthora taxa in 59.4% of soil samples from seven (87.5%) nurseries. Additional baiting of compost was carried out in two nurseries and two Phytophthora species were recovered. Irrigation water was examined in three nurseries by baiting or by direct isolation from partially decomposed floating leaves collected from the water source, and two Phytophthora species were obtained. Illumina sequencing of soil and water samples was done in two and one nurseries, respectively. Phytophthora reads were identified as 45 Phytophthora taxa, 15 of them previously unknown taxa from Clades 6, 7, 8 and 9. Another 11 taxa belonged to known or undescribed species of the oomycete genera Globisporangium, Hyaloperonospora, Nothophytophthora, Peronospora and Plasmopara. Overall, with both techniques 50 Phytophthora taxa were detected with five taxa (P. taxon organica, P. plurivora, P. rosacearum, P. syringae and P. transitoria) being exclusively detected by baiting and 38 only by DNA metabarcoding. Particularly common records in DNA barcoding were P. cinnamomi and P. lateralis which were not isolated by baiting. Only seven species were detected by both techniques. It is recommended to use the combination of both techniques to determine true diversity of Phytophthora in managed or natural ecosystems and reveal the presence of rare or unknown Phytophthora taxa.",
journal = "European Journal of Plant Pathology",
title = "Hidden Phytophthora diversity unveiled in tree nurseries of the Czech Republic with traditional and metabarcoding techniques",
pages = "156-131",
number = "1",
volume = "170",
doi = "10.1007/s10658-024-02886-1",
url = "conv_1791"
}

Bacova, A., Cooke, D. E. L., Milenković, I., Majek, T., Nagy, Z., Corcobado, T., Randall, E., Keillor, B., Cock, P. J. A., Horta Jung, M., Jung, T.,& Tomsovsky, M.. (2024). Hidden Phytophthora diversity unveiled in tree nurseries of the Czech Republic with traditional and metabarcoding techniques. in European Journal of Plant Pathology, 170(1), 131-156.
https://doi.org/10.1007/s10658-024-02886-1
conv_1791

Bacova A, Cooke DEL, Milenković I, Majek T, Nagy Z, Corcobado T, Randall E, Keillor B, Cock PJA, Horta Jung M, Jung T, Tomsovsky M. Hidden Phytophthora diversity unveiled in tree nurseries of the Czech Republic with traditional and metabarcoding techniques. in European Journal of Plant Pathology. 2024;170(1):131-156.
doi:10.1007/s10658-024-02886-1
conv_1791 .

Bacova, Aneta, Cooke, David E. L., Milenković, Ivan, Majek, Tomas, Nagy, Zoltan, Corcobado, Tamara, Randall, Eva, Keillor, Beatrix, Cock, Peter J. A., Horta Jung, Marilia, Jung, Thomas, Tomsovsky, Michal, "Hidden Phytophthora diversity unveiled in tree nurseries of the Czech Republic with traditional and metabarcoding techniques" in European Journal of Plant Pathology, 170, no. 1 (2024):131-156,
https://doi.org/10.1007/s10658-024-02886-1 .,
conv_1791 .

TY  - JOUR
AU  - Caballol, Maria
AU  - Redondo, Miguel A.
AU  - Catalan, Nuria
AU  - Corcobado, Tamara
AU  - Jung, Thomas
AU  - Marcais, Benoit
AU  - Milenković, Ivan
AU  - Nemesio-Gorriz, Miguel
AU  - Stenlid, Jan
AU  - Oliva, Jonas
PY  - 2024
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1517
AB  - Climate shapes the distribution of plant-associated microbes such as mycorrhizal and endophytic fungi. However, the role of climate in plant pathogen community assembly is less understood. Here, we explored the role of climate in the assembly of Phytophthora communities at  gt 250 sites along a latitudinal gradient from Spain to northern Sweden and an altitudinal gradient from the Spanish Pyrenees to lowland areas. Communities were detected by ITS sequencing of river filtrates. Mediation analysis supported the role of climate in the biogeography of Phytophthora and ruled out other environmental factors such as geography or tree diversity. Comparisons of functional and species diversity showed that environmental filtering dominated over competitive exclusion in Europe. Temperature and precipitation acted as environmental filters at different extremes of the gradients. In northern regions, winter temperatures acted as an environmental filter on Phytophthora community assembly, selecting species adapted to survive low minimum temperatures. In southern latitudes, a hot dry climate was the main environmental filter, resulting in communities dominated by drought-tolerant Phytophthora species with thick oospore walls, a high optimum temperature for growth, and a high maximum temperature limit for growth. By taking a community ecology approach, we show that the establishment of Phytophthora plant pathogens in Europe is mainly restricted by cold temperatures.
T2  - ISME Journal
T1  - Climate acts as an environmental filter to plant pathogens
IS  - 1
VL  - 18
DO  - 10.1093/ismejo/wrae010
UR  - conv_1787
ER  - 

@article{
author = "Caballol, Maria and Redondo, Miguel A. and Catalan, Nuria and Corcobado, Tamara and Jung, Thomas and Marcais, Benoit and Milenković, Ivan and Nemesio-Gorriz, Miguel and Stenlid, Jan and Oliva, Jonas",
year = "2024",
abstract = "Climate shapes the distribution of plant-associated microbes such as mycorrhizal and endophytic fungi. However, the role of climate in plant pathogen community assembly is less understood. Here, we explored the role of climate in the assembly of Phytophthora communities at  gt 250 sites along a latitudinal gradient from Spain to northern Sweden and an altitudinal gradient from the Spanish Pyrenees to lowland areas. Communities were detected by ITS sequencing of river filtrates. Mediation analysis supported the role of climate in the biogeography of Phytophthora and ruled out other environmental factors such as geography or tree diversity. Comparisons of functional and species diversity showed that environmental filtering dominated over competitive exclusion in Europe. Temperature and precipitation acted as environmental filters at different extremes of the gradients. In northern regions, winter temperatures acted as an environmental filter on Phytophthora community assembly, selecting species adapted to survive low minimum temperatures. In southern latitudes, a hot dry climate was the main environmental filter, resulting in communities dominated by drought-tolerant Phytophthora species with thick oospore walls, a high optimum temperature for growth, and a high maximum temperature limit for growth. By taking a community ecology approach, we show that the establishment of Phytophthora plant pathogens in Europe is mainly restricted by cold temperatures.",
journal = "ISME Journal",
title = "Climate acts as an environmental filter to plant pathogens",
number = "1",
volume = "18",
doi = "10.1093/ismejo/wrae010",
url = "conv_1787"
}

Caballol, M., Redondo, M. A., Catalan, N., Corcobado, T., Jung, T., Marcais, B., Milenković, I., Nemesio-Gorriz, M., Stenlid, J.,& Oliva, J.. (2024). Climate acts as an environmental filter to plant pathogens. in ISME Journal, 18(1).
https://doi.org/10.1093/ismejo/wrae010
conv_1787

Caballol M, Redondo MA, Catalan N, Corcobado T, Jung T, Marcais B, Milenković I, Nemesio-Gorriz M, Stenlid J, Oliva J. Climate acts as an environmental filter to plant pathogens. in ISME Journal. 2024;18(1).
doi:10.1093/ismejo/wrae010
conv_1787 .

Caballol, Maria, Redondo, Miguel A., Catalan, Nuria, Corcobado, Tamara, Jung, Thomas, Marcais, Benoit, Milenković, Ivan, Nemesio-Gorriz, Miguel, Stenlid, Jan, Oliva, Jonas, "Climate acts as an environmental filter to plant pathogens" in ISME Journal, 18, no. 1 (2024),
https://doi.org/10.1093/ismejo/wrae010 .,
conv_1787 .

TY  - JOUR
AU  - Mullett, Martin S.
AU  - Harris, Anna R.
AU  - Scanu, Bruno
AU  - Van Poucke, Kris
AU  - Leboldus, Jared
AU  - Stamm, Elizabeth
AU  - Bourret, Tyler B.
AU  - Christova, Petya K.
AU  - Oliva, Jonas
AU  - Redondo, Miguel A.
AU  - Talgo, Venche
AU  - Corcobado, Tamara
AU  - Milenković, Ivan
AU  - Horta Jung, Marilia
AU  - Webber, Joan
AU  - Heungens, Kurt
AU  - Jung, Thomas
PY  - 2024
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1496
AB  - Phytophthora pseudosyringae is a self-fertile pathogen of woody plants, particularly associated with tree species from the genera Fagus, Notholithocarpus, Nothofagus and Quercus, which is found across Europe and in parts of North America and Chile. It can behave as a soil pathogen infecting roots and the stem collar region, as well as an aerial pathogen infecting leaves, twigs and stem barks, causing particular damage in the United Kingdom and western North America. The population structure, migration and potential outcrossing of a worldwide collection of isolates were investigated using genotyping-by-sequencing. Coalescent-based migration analysis revealed that the North American population originated from Europe. Historical gene flow has occurred between the continents in both directions to some extent, yet contemporary migration is overwhelmingly from Europe to North America. Two broad population clusters dominate the global population of the pathogen, with a subgroup derived from one of the main clusters found only in western North America. Index of association and network analyses indicate an influential level of outcrossing has occurred in this preferentially inbreeding, homothallic oomycete. Outcrossing between the two main population clusters has created distinct subgroups of admixed individuals that are, however, less common than the main population clusters. Differences in life history traits between the two main population clusters should be further investigated together with virulence and host range tests to evaluate the risk each population poses to natural environments worldwide.
T2  - Molecular Plant Pathology
T1  - Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae
IS  - 4
VL  - 25
DO  - 10.1111/mpp.13450
UR  - conv_1780
ER  - 

@article{
author = "Mullett, Martin S. and Harris, Anna R. and Scanu, Bruno and Van Poucke, Kris and Leboldus, Jared and Stamm, Elizabeth and Bourret, Tyler B. and Christova, Petya K. and Oliva, Jonas and Redondo, Miguel A. and Talgo, Venche and Corcobado, Tamara and Milenković, Ivan and Horta Jung, Marilia and Webber, Joan and Heungens, Kurt and Jung, Thomas",
year = "2024",
abstract = "Phytophthora pseudosyringae is a self-fertile pathogen of woody plants, particularly associated with tree species from the genera Fagus, Notholithocarpus, Nothofagus and Quercus, which is found across Europe and in parts of North America and Chile. It can behave as a soil pathogen infecting roots and the stem collar region, as well as an aerial pathogen infecting leaves, twigs and stem barks, causing particular damage in the United Kingdom and western North America. The population structure, migration and potential outcrossing of a worldwide collection of isolates were investigated using genotyping-by-sequencing. Coalescent-based migration analysis revealed that the North American population originated from Europe. Historical gene flow has occurred between the continents in both directions to some extent, yet contemporary migration is overwhelmingly from Europe to North America. Two broad population clusters dominate the global population of the pathogen, with a subgroup derived from one of the main clusters found only in western North America. Index of association and network analyses indicate an influential level of outcrossing has occurred in this preferentially inbreeding, homothallic oomycete. Outcrossing between the two main population clusters has created distinct subgroups of admixed individuals that are, however, less common than the main population clusters. Differences in life history traits between the two main population clusters should be further investigated together with virulence and host range tests to evaluate the risk each population poses to natural environments worldwide.",
journal = "Molecular Plant Pathology",
title = "Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae",
number = "4",
volume = "25",
doi = "10.1111/mpp.13450",
url = "conv_1780"
}

Mullett, M. S., Harris, A. R., Scanu, B., Van Poucke, K., Leboldus, J., Stamm, E., Bourret, T. B., Christova, P. K., Oliva, J., Redondo, M. A., Talgo, V., Corcobado, T., Milenković, I., Horta Jung, M., Webber, J., Heungens, K.,& Jung, T.. (2024). Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae. in Molecular Plant Pathology, 25(4).
https://doi.org/10.1111/mpp.13450
conv_1780

Mullett MS, Harris AR, Scanu B, Van Poucke K, Leboldus J, Stamm E, Bourret TB, Christova PK, Oliva J, Redondo MA, Talgo V, Corcobado T, Milenković I, Horta Jung M, Webber J, Heungens K, Jung T. Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae. in Molecular Plant Pathology. 2024;25(4).
doi:10.1111/mpp.13450
conv_1780 .

Mullett, Martin S., Harris, Anna R., Scanu, Bruno, Van Poucke, Kris, Leboldus, Jared, Stamm, Elizabeth, Bourret, Tyler B., Christova, Petya K., Oliva, Jonas, Redondo, Miguel A., Talgo, Venche, Corcobado, Tamara, Milenković, Ivan, Horta Jung, Marilia, Webber, Joan, Heungens, Kurt, Jung, Thomas, "Phylogeography, origin and population structure of the self-fertile emerging plant pathogen Phytophthora pseudosyringae" in Molecular Plant Pathology, 25, no. 4 (2024),
https://doi.org/10.1111/mpp.13450 .,
conv_1780 .

TY  - JOUR
AU  - Jung, T.
AU  - Milenković, Ivan
AU  - Balci, Y.
AU  - Janousek, J.
AU  - Kudlacek, Tomas
AU  - Nagy, Zoltan
AU  - Baharuddin, B.
AU  - Bakonyi, J.
AU  - Broders, Kirk D.
AU  - Cacciola, S. O.
AU  - Chang, T. -T.
AU  - Chi, N. M.
AU  - Corcobado, Tamara
AU  - Cravador, A.
AU  - Đorđević, B.
AU  - Duran, A.
AU  - Ferreira, M.
AU  - Fu, C. -H.
AU  - Garcia, L.
AU  - Hieno, A.
AU  - Ho, H. -H.
AU  - Hong, C.
AU  - Junaid, M.
AU  - Kageyama, K.
AU  - Kuswinanti, T.
AU  - Maia, C.
AU  - Majek, Tomas
AU  - Masuya, H.
AU  - Lio, G. Magnano di San
AU  - Mendieta-Araica, B.
AU  - Nasri, N.
AU  - Oliveira, L. S. S.
AU  - Pane, A.
AU  - Perez-Sierra, Ana
AU  - Rosmana, A.
AU  - von Stowasser, E. Sanfuentes
AU  - Scanu, Bruno
AU  - Singh, R.
AU  - Stanivuković, Zoran
AU  - Tarigan, Marthin
AU  - Thu, P. Q.
AU  - Tomić, Z.
AU  - Tomsovsky, M.
AU  - Uematsu, Seiji
AU  - Webber, Joan
AU  - Zeng, H. -C.
AU  - Zheng, F. -C.
AU  - Brasier, Clive M.
AU  - Horta Jung, Marilia
PY  - 2024
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1492
AB  - During 25 surveys of global Phytophthora diversity, conducted between 1998 and 2020, 43 new species were detected in natural ecosystems and, occasionally, in nurseries and outplantings in Europe, Southeast and East Asia and the Americas. Based on a multigene phylogeny of nine nuclear and four mitochondrial gene regions they were assigned to five of the six known subclades, 2a-c, e and f, of Phytophthora major Clade 2 and the new subclade 2g. The evolutionary history of the Clade appears to have involved the pre-Gondwanan divergence of three extant subclades, 2c, 2e and 2f, all having disjunct natural distributions on separate continents and comprising species with a soilborne and aquatic lifestyle and, in addition, a few partially aerial species in Clade 2c; and the post-Gondwanan evolution of subclades 2a and 2g in Southeast/East Asia and 2b in South America, respectively, from their common ancestor. Species in Clade 2g are soilborne whereas Clade 2b comprises both soil-inhabiting and aerial species. Clade 2a has evolved further towards an aerial lifestyle comprising only species which are predominantly or partially airborne. Based on high nuclear heterozygosity levels ca. 38 % of the taxa in Clades 2a and 2b could be some form of hybrid, and the hybridity may be favoured by an A1/A2 breeding system and an aerial life style. Circumstantial evidence suggests the now 93 described species and informally designated taxa in Clade 2 result from both allopatric non-adaptive and sympatric adaptive radiations. They represent most morphological and physiological characters, breeding systems, lifestyles and forms of host specialism found across the Phytophthora clades as a whole, demonstrating the strong biological cohesiveness of the genus. The finding of 43 previously unknown species from a single Phytophthora clade highlight a critical lack of information on the scale of the unknown pathogen threats to forests and natural ecosystems, underlining the risk of basing plant biosecurity protocols mainly on lists of named organisms. More surveys in natural ecosystems of yet unsurveyed regions in Africa, Asia, Central and South America are needed to unveil the full diversity of the clade and the factors driving diversity, speciation and adaptation in Phytophthora.
T2  - Studies in Mycology
T1  - Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity
EP  - 388
IS  - 107
SP  - 251
DO  - 10.3114/sim.2024.107.04
UR  - conv_1770
ER  - 

@article{
author = "Jung, T. and Milenković, Ivan and Balci, Y. and Janousek, J. and Kudlacek, Tomas and Nagy, Zoltan and Baharuddin, B. and Bakonyi, J. and Broders, Kirk D. and Cacciola, S. O. and Chang, T. -T. and Chi, N. M. and Corcobado, Tamara and Cravador, A. and Đorđević, B. and Duran, A. and Ferreira, M. and Fu, C. -H. and Garcia, L. and Hieno, A. and Ho, H. -H. and Hong, C. and Junaid, M. and Kageyama, K. and Kuswinanti, T. and Maia, C. and Majek, Tomas and Masuya, H. and Lio, G. Magnano di San and Mendieta-Araica, B. and Nasri, N. and Oliveira, L. S. S. and Pane, A. and Perez-Sierra, Ana and Rosmana, A. and von Stowasser, E. Sanfuentes and Scanu, Bruno and Singh, R. and Stanivuković, Zoran and Tarigan, Marthin and Thu, P. Q. and Tomić, Z. and Tomsovsky, M. and Uematsu, Seiji and Webber, Joan and Zeng, H. -C. and Zheng, F. -C. and Brasier, Clive M. and Horta Jung, Marilia",
year = "2024",
abstract = "During 25 surveys of global Phytophthora diversity, conducted between 1998 and 2020, 43 new species were detected in natural ecosystems and, occasionally, in nurseries and outplantings in Europe, Southeast and East Asia and the Americas. Based on a multigene phylogeny of nine nuclear and four mitochondrial gene regions they were assigned to five of the six known subclades, 2a-c, e and f, of Phytophthora major Clade 2 and the new subclade 2g. The evolutionary history of the Clade appears to have involved the pre-Gondwanan divergence of three extant subclades, 2c, 2e and 2f, all having disjunct natural distributions on separate continents and comprising species with a soilborne and aquatic lifestyle and, in addition, a few partially aerial species in Clade 2c; and the post-Gondwanan evolution of subclades 2a and 2g in Southeast/East Asia and 2b in South America, respectively, from their common ancestor. Species in Clade 2g are soilborne whereas Clade 2b comprises both soil-inhabiting and aerial species. Clade 2a has evolved further towards an aerial lifestyle comprising only species which are predominantly or partially airborne. Based on high nuclear heterozygosity levels ca. 38 % of the taxa in Clades 2a and 2b could be some form of hybrid, and the hybridity may be favoured by an A1/A2 breeding system and an aerial life style. Circumstantial evidence suggests the now 93 described species and informally designated taxa in Clade 2 result from both allopatric non-adaptive and sympatric adaptive radiations. They represent most morphological and physiological characters, breeding systems, lifestyles and forms of host specialism found across the Phytophthora clades as a whole, demonstrating the strong biological cohesiveness of the genus. The finding of 43 previously unknown species from a single Phytophthora clade highlight a critical lack of information on the scale of the unknown pathogen threats to forests and natural ecosystems, underlining the risk of basing plant biosecurity protocols mainly on lists of named organisms. More surveys in natural ecosystems of yet unsurveyed regions in Africa, Asia, Central and South America are needed to unveil the full diversity of the clade and the factors driving diversity, speciation and adaptation in Phytophthora.",
journal = "Studies in Mycology",
title = "Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity",
pages = "388-251",
number = "107",
doi = "10.3114/sim.2024.107.04",
url = "conv_1770"
}

Jung, T., Milenković, I., Balci, Y., Janousek, J., Kudlacek, T., Nagy, Z., Baharuddin, B., Bakonyi, J., Broders, K. D., Cacciola, S. O., Chang, T. -T., Chi, N. M., Corcobado, T., Cravador, A., Đorđević, B., Duran, A., Ferreira, M., Fu, C. -H., Garcia, L., Hieno, A., Ho, H. -H., Hong, C., Junaid, M., Kageyama, K., Kuswinanti, T., Maia, C., Majek, T., Masuya, H., Lio, G. M. d. S., Mendieta-Araica, B., Nasri, N., Oliveira, L. S. S., Pane, A., Perez-Sierra, A., Rosmana, A., von Stowasser, E. S., Scanu, B., Singh, R., Stanivuković, Z., Tarigan, M., Thu, P. Q., Tomić, Z., Tomsovsky, M., Uematsu, S., Webber, J., Zeng, H. -C., Zheng, F. -C., Brasier, C. M.,& Horta Jung, M.. (2024). Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity. in Studies in Mycology(107), 251-388.
https://doi.org/10.3114/sim.2024.107.04
conv_1770

Jung T, Milenković I, Balci Y, Janousek J, Kudlacek T, Nagy Z, Baharuddin B, Bakonyi J, Broders KD, Cacciola SO, Chang T-, Chi NM, Corcobado T, Cravador A, Đorđević B, Duran A, Ferreira M, Fu C-, Garcia L, Hieno A, Ho H-, Hong C, Junaid M, Kageyama K, Kuswinanti T, Maia C, Majek T, Masuya H, Lio GMDS, Mendieta-Araica B, Nasri N, Oliveira LSS, Pane A, Perez-Sierra A, Rosmana A, von Stowasser ES, Scanu B, Singh R, Stanivuković Z, Tarigan M, Thu PQ, Tomić Z, Tomsovsky M, Uematsu S, Webber J, Zeng H-, Zheng F-, Brasier CM, Horta Jung M. Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity. in Studies in Mycology. 2024;(107):251-388.
doi:10.3114/sim.2024.107.04
conv_1770 .

Jung, T., Milenković, Ivan, Balci, Y., Janousek, J., Kudlacek, Tomas, Nagy, Zoltan, Baharuddin, B., Bakonyi, J., Broders, Kirk D., Cacciola, S. O., Chang, T. -T., Chi, N. M., Corcobado, Tamara, Cravador, A., Đorđević, B., Duran, A., Ferreira, M., Fu, C. -H., Garcia, L., Hieno, A., Ho, H. -H., Hong, C., Junaid, M., Kageyama, K., Kuswinanti, T., Maia, C., Majek, Tomas, Masuya, H., Lio, G. Magnano di San, Mendieta-Araica, B., Nasri, N., Oliveira, L. S. S., Pane, A., Perez-Sierra, Ana, Rosmana, A., von Stowasser, E. Sanfuentes, Scanu, Bruno, Singh, R., Stanivuković, Zoran, Tarigan, Marthin, Thu, P. Q., Tomić, Z., Tomsovsky, M., Uematsu, Seiji, Webber, Joan, Zeng, H. -C., Zheng, F. -C., Brasier, Clive M., Horta Jung, Marilia, "Worldwide forest surveys reveal forty-three new species in Phytophthora major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity" in Studies in Mycology, no. 107 (2024):251-388,
https://doi.org/10.3114/sim.2024.107.04 .,
conv_1770 .

TY  - JOUR
AU  - Corcobado, Tamara
AU  - Cech, Thomas L.
AU  - Daxer, Andreas
AU  - Datkova, Henrieta
AU  - Janousek, Josef
AU  - Patra, Sneha
AU  - Jahn, Daniella
AU  - Huettler, Christine
AU  - Milenković, Ivan
AU  - Tomsovsky, Michal
AU  - Horta Jung, Marilia
AU  - Jung, Thomas
PY  - 2023
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1441
AB  - Waterways are ideal pathways for Phytophthora dispersal and potential introduction to terrestrial ecosystems. While many Phytophthora species from phylogenetic clades 6, 9 and 10 are predominant oomycetes in watercourses due to their adaptation to a lifestyle as saprotrophs and opportunistic pathogens of riparian plants, species from clades 2, 7 and 8 are predominantly soil- or airborne using aquatic habitats as temporal niches for spreading and invading terrestrial sites along the watercourses. In contrast to forest ecosystems, knowledge of Phytophthora diversity in watercourses in Central Europe is limited. Between 2014 and 2019 extensive surveys of streams and rivers were undertaken across Austria, in South Moravia, Czech Republic and Zilina province, Slovakia to unveil the diversity and distribution of Phytophthora and related oomycetes. In addition, in Austria riparian forests of black alder (Alnus glutinosa) and grey alder (A. incana) in lowlands and in the Alps were examined. A variety of Phytophthora species from clades 2, 6, 7, 8, 9 and 10 were isolated, with clade 6 species showing the widest distribution and abundance. Furthermore, interspecific clade 6 hybrids and other oomycetes such as Halophytophthora fluviatilis and undescribed Nothophytophthora spp. were also obtained. In riparian alders, symptoms of Phytophthora infections were associated with species from the P.xalni complex and P. plurivora. Phytophthora plurivora was most common in alder stands whereas P. uniformis was the oomycete species occurring at the highest altitude in alpine riparian areas.
T2  - Mycological Progress
T1  - Phytophthora , Nothophytophthora and Halophytophthora diversity in rivers, streams and riparian alder ecosystems of Central Europe
IS  - 7
VL  - 22
DO  - 10.1007/s11557-023-01898-1
UR  - conv_1732
ER  - 

@article{
author = "Corcobado, Tamara and Cech, Thomas L. and Daxer, Andreas and Datkova, Henrieta and Janousek, Josef and Patra, Sneha and Jahn, Daniella and Huettler, Christine and Milenković, Ivan and Tomsovsky, Michal and Horta Jung, Marilia and Jung, Thomas",
year = "2023",
abstract = "Waterways are ideal pathways for Phytophthora dispersal and potential introduction to terrestrial ecosystems. While many Phytophthora species from phylogenetic clades 6, 9 and 10 are predominant oomycetes in watercourses due to their adaptation to a lifestyle as saprotrophs and opportunistic pathogens of riparian plants, species from clades 2, 7 and 8 are predominantly soil- or airborne using aquatic habitats as temporal niches for spreading and invading terrestrial sites along the watercourses. In contrast to forest ecosystems, knowledge of Phytophthora diversity in watercourses in Central Europe is limited. Between 2014 and 2019 extensive surveys of streams and rivers were undertaken across Austria, in South Moravia, Czech Republic and Zilina province, Slovakia to unveil the diversity and distribution of Phytophthora and related oomycetes. In addition, in Austria riparian forests of black alder (Alnus glutinosa) and grey alder (A. incana) in lowlands and in the Alps were examined. A variety of Phytophthora species from clades 2, 6, 7, 8, 9 and 10 were isolated, with clade 6 species showing the widest distribution and abundance. Furthermore, interspecific clade 6 hybrids and other oomycetes such as Halophytophthora fluviatilis and undescribed Nothophytophthora spp. were also obtained. In riparian alders, symptoms of Phytophthora infections were associated with species from the P.xalni complex and P. plurivora. Phytophthora plurivora was most common in alder stands whereas P. uniformis was the oomycete species occurring at the highest altitude in alpine riparian areas.",
journal = "Mycological Progress",
title = "Phytophthora , Nothophytophthora and Halophytophthora diversity in rivers, streams and riparian alder ecosystems of Central Europe",
number = "7",
volume = "22",
doi = "10.1007/s11557-023-01898-1",
url = "conv_1732"
}

Corcobado, T., Cech, T. L., Daxer, A., Datkova, H., Janousek, J., Patra, S., Jahn, D., Huettler, C., Milenković, I., Tomsovsky, M., Horta Jung, M.,& Jung, T.. (2023). Phytophthora , Nothophytophthora and Halophytophthora diversity in rivers, streams and riparian alder ecosystems of Central Europe. in Mycological Progress, 22(7).
https://doi.org/10.1007/s11557-023-01898-1
conv_1732

Corcobado T, Cech TL, Daxer A, Datkova H, Janousek J, Patra S, Jahn D, Huettler C, Milenković I, Tomsovsky M, Horta Jung M, Jung T. Phytophthora , Nothophytophthora and Halophytophthora diversity in rivers, streams and riparian alder ecosystems of Central Europe. in Mycological Progress. 2023;22(7).
doi:10.1007/s11557-023-01898-1
conv_1732 .

Corcobado, Tamara, Cech, Thomas L., Daxer, Andreas, Datkova, Henrieta, Janousek, Josef, Patra, Sneha, Jahn, Daniella, Huettler, Christine, Milenković, Ivan, Tomsovsky, Michal, Horta Jung, Marilia, Jung, Thomas, "Phytophthora , Nothophytophthora and Halophytophthora diversity in rivers, streams and riparian alder ecosystems of Central Europe" in Mycological Progress, 22, no. 7 (2023),
https://doi.org/10.1007/s11557-023-01898-1 .,
conv_1732 .

TY  - JOUR
AU  - Corcobado, Tamara
AU  - Milenković, Ivan
AU  - Saiz-Fernandez, Inigo
AU  - Kudlacek, Tomas
AU  - Plichta, Roman
AU  - Majek, Tomas
AU  - Bacova, Aneta
AU  - Datkova, Henrieta
AU  - Dalya, Laszlo Benedek
AU  - Trifković, Miloš
AU  - Mureddu, Davide
AU  - Racko, Vladimir
AU  - Kardosova, Monika
AU  - Durković, Jaroslav
AU  - Rattunde, Roman
AU  - Jung, Thomas
PY  - 2022
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1322
AB  - Phytophthora infections are followed by histological alterations, physiological and metabolomic adjustments in the host but very few studies contemplate these changes simultaneously. Fagus sylvatica seedlings were inoculated with A1 and A2 mating types of the heterothallic P. xcambivora and with the homothallic P. plurivora to identify plant physiological and metabolomic changes accompanying microscope observations of the colonization process one, two and three weeks after inoculation. Phytophthora plurivora-infected plants died at a faster pace than those inoculated with P. xcambivora and showed higher mortality than P. xcambivora A1-infected plants. Phytophthora xcambivora A1 and A2 caused similar progression and total rate of mortality. Most differences in the physiological parameters between inoculated and non-inoculated plants were detected two weeks after inoculation. Alterations in primary and secondary metabolites in roots and leaves were demonstrated for all the inoculated plants two and three weeks after inoculation. The results indicate that P. plurivora is more aggressive to Fagus sylvatica seedlings than both mating types of P. xcambivora while P. xcambivora A1 showed a slower infection mode than P. xcambivora A2 and led to minor plant metabolomic adjustments.
T2  - Journal of Fungi
T1  - Metabolomic and Physiological Changes in Fagus sylvatica Seedlings Infected with Phytophthora plurivora and the A1 and A2 Mating Types of P. xcambivora
IS  - 3
VL  - 8
DO  - 10.3390/jof8030298
UR  - conv_1623
ER  - 

@article{
author = "Corcobado, Tamara and Milenković, Ivan and Saiz-Fernandez, Inigo and Kudlacek, Tomas and Plichta, Roman and Majek, Tomas and Bacova, Aneta and Datkova, Henrieta and Dalya, Laszlo Benedek and Trifković, Miloš and Mureddu, Davide and Racko, Vladimir and Kardosova, Monika and Durković, Jaroslav and Rattunde, Roman and Jung, Thomas",
year = "2022",
abstract = "Phytophthora infections are followed by histological alterations, physiological and metabolomic adjustments in the host but very few studies contemplate these changes simultaneously. Fagus sylvatica seedlings were inoculated with A1 and A2 mating types of the heterothallic P. xcambivora and with the homothallic P. plurivora to identify plant physiological and metabolomic changes accompanying microscope observations of the colonization process one, two and three weeks after inoculation. Phytophthora plurivora-infected plants died at a faster pace than those inoculated with P. xcambivora and showed higher mortality than P. xcambivora A1-infected plants. Phytophthora xcambivora A1 and A2 caused similar progression and total rate of mortality. Most differences in the physiological parameters between inoculated and non-inoculated plants were detected two weeks after inoculation. Alterations in primary and secondary metabolites in roots and leaves were demonstrated for all the inoculated plants two and three weeks after inoculation. The results indicate that P. plurivora is more aggressive to Fagus sylvatica seedlings than both mating types of P. xcambivora while P. xcambivora A1 showed a slower infection mode than P. xcambivora A2 and led to minor plant metabolomic adjustments.",
journal = "Journal of Fungi",
title = "Metabolomic and Physiological Changes in Fagus sylvatica Seedlings Infected with Phytophthora plurivora and the A1 and A2 Mating Types of P. xcambivora",
number = "3",
volume = "8",
doi = "10.3390/jof8030298",
url = "conv_1623"
}

Corcobado, T., Milenković, I., Saiz-Fernandez, I., Kudlacek, T., Plichta, R., Majek, T., Bacova, A., Datkova, H., Dalya, L. B., Trifković, M., Mureddu, D., Racko, V., Kardosova, M., Durković, J., Rattunde, R.,& Jung, T.. (2022). Metabolomic and Physiological Changes in Fagus sylvatica Seedlings Infected with Phytophthora plurivora and the A1 and A2 Mating Types of P. xcambivora. in Journal of Fungi, 8(3).
https://doi.org/10.3390/jof8030298
conv_1623

Corcobado T, Milenković I, Saiz-Fernandez I, Kudlacek T, Plichta R, Majek T, Bacova A, Datkova H, Dalya LB, Trifković M, Mureddu D, Racko V, Kardosova M, Durković J, Rattunde R, Jung T. Metabolomic and Physiological Changes in Fagus sylvatica Seedlings Infected with Phytophthora plurivora and the A1 and A2 Mating Types of P. xcambivora. in Journal of Fungi. 2022;8(3).
doi:10.3390/jof8030298
conv_1623 .

Corcobado, Tamara, Milenković, Ivan, Saiz-Fernandez, Inigo, Kudlacek, Tomas, Plichta, Roman, Majek, Tomas, Bacova, Aneta, Datkova, Henrieta, Dalya, Laszlo Benedek, Trifković, Miloš, Mureddu, Davide, Racko, Vladimir, Kardosova, Monika, Durković, Jaroslav, Rattunde, Roman, Jung, Thomas, "Metabolomic and Physiological Changes in Fagus sylvatica Seedlings Infected with Phytophthora plurivora and the A1 and A2 Mating Types of P. xcambivora" in Journal of Fungi, 8, no. 3 (2022),
https://doi.org/10.3390/jof8030298 .,
conv_1623 .

TY  - JOUR
AU  - Marques, Ines Gomes
AU  - Faria, Carla
AU  - Rodrigues Conceicao, Sofia Isabel
AU  - Jansson, Roland
AU  - Corcobado, Tamara
AU  - Milanović, Slobodan
AU  - Laurent, Yann
AU  - Bernez, Ivan
AU  - Dufour, Simon
AU  - Mandak, Bohumil
AU  - Ennouni, Hassan
AU  - Sahli, Abdelouahab
AU  - Ater, Mohammed
AU  - Dorado, Francisco Javier
AU  - Caperta, Ana Delaunay
AU  - David, Teresa Soares
AU  - Solla, Alejandro
AU  - Rodriguez-Gonzalez, Patricia Maria
PY  - 2022
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1371
AB  - The degradation of riparian ecosystems occurring throughout the past decades has motivated efforts aimed at the restoration of these ecosystems. The success of active revegetation approaches to restoration requires appropriate selection of reproductive material, which in turn requires knowledge of seed traits and germination. Alnus glutinosa (L.) Gaertn. (common alder) is a key riparian tree widely used in restoration projects, and has recently been classified as comprising three species: A. glutinosa; A. lusitanica Vit, Douda, & Mandak; and A. rohlenae Vit, Douda, & Mandak. To help guide restoration species selection, we assessed differences among populations of these species by (1) investigating seed weight, morphology, and germination success from a large population set and (2) modeling germination success in each species in relation to morphological traits and environmental conditions. Seeds were collected from 12 populations encompassing the latitudinal extremes of the species complex, and were then characterized and germinated. Ploidy levels and species were distinguished using cytometric analysis. Site-level climatic data and seed morphology data were used to model germination success for each species. All seed traits differed between populations and one morphological-trait (seed weight-to-area ratio) differed significantly between the three species. Germination modeling showed that the southwestern species, A. lusitanica, responded positively to high temperature extremes, suggesting tolerance to the climate changes projected for southern Europe. Populations of A. lusitanica located at the latitudinal rear edge of common alder's distribution appear to show establishment-facilitating adaptations, and therefore may contribute to ecological restoration efforts under a range of environmental conditions.
T2  - Restoration Ecology
T1  - Germination and seed traits in common alder ( Alnus spp.): the potential contribution of rear-edge populations to ecological restoration success
IS  - 3
VL  - 30
DO  - 10.1111/rec.13517
UR  - conv_1573
ER  - 

@article{
author = "Marques, Ines Gomes and Faria, Carla and Rodrigues Conceicao, Sofia Isabel and Jansson, Roland and Corcobado, Tamara and Milanović, Slobodan and Laurent, Yann and Bernez, Ivan and Dufour, Simon and Mandak, Bohumil and Ennouni, Hassan and Sahli, Abdelouahab and Ater, Mohammed and Dorado, Francisco Javier and Caperta, Ana Delaunay and David, Teresa Soares and Solla, Alejandro and Rodriguez-Gonzalez, Patricia Maria",
year = "2022",
abstract = "The degradation of riparian ecosystems occurring throughout the past decades has motivated efforts aimed at the restoration of these ecosystems. The success of active revegetation approaches to restoration requires appropriate selection of reproductive material, which in turn requires knowledge of seed traits and germination. Alnus glutinosa (L.) Gaertn. (common alder) is a key riparian tree widely used in restoration projects, and has recently been classified as comprising three species: A. glutinosa; A. lusitanica Vit, Douda, & Mandak; and A. rohlenae Vit, Douda, & Mandak. To help guide restoration species selection, we assessed differences among populations of these species by (1) investigating seed weight, morphology, and germination success from a large population set and (2) modeling germination success in each species in relation to morphological traits and environmental conditions. Seeds were collected from 12 populations encompassing the latitudinal extremes of the species complex, and were then characterized and germinated. Ploidy levels and species were distinguished using cytometric analysis. Site-level climatic data and seed morphology data were used to model germination success for each species. All seed traits differed between populations and one morphological-trait (seed weight-to-area ratio) differed significantly between the three species. Germination modeling showed that the southwestern species, A. lusitanica, responded positively to high temperature extremes, suggesting tolerance to the climate changes projected for southern Europe. Populations of A. lusitanica located at the latitudinal rear edge of common alder's distribution appear to show establishment-facilitating adaptations, and therefore may contribute to ecological restoration efforts under a range of environmental conditions.",
journal = "Restoration Ecology",
title = "Germination and seed traits in common alder ( Alnus spp.): the potential contribution of rear-edge populations to ecological restoration success",
number = "3",
volume = "30",
doi = "10.1111/rec.13517",
url = "conv_1573"
}

Marques, I. G., Faria, C., Rodrigues Conceicao, S. I., Jansson, R., Corcobado, T., Milanović, S., Laurent, Y., Bernez, I., Dufour, S., Mandak, B., Ennouni, H., Sahli, A., Ater, M., Dorado, F. J., Caperta, A. D., David, T. S., Solla, A.,& Rodriguez-Gonzalez, P. M.. (2022). Germination and seed traits in common alder ( Alnus spp.): the potential contribution of rear-edge populations to ecological restoration success. in Restoration Ecology, 30(3).
https://doi.org/10.1111/rec.13517
conv_1573

Marques IG, Faria C, Rodrigues Conceicao SI, Jansson R, Corcobado T, Milanović S, Laurent Y, Bernez I, Dufour S, Mandak B, Ennouni H, Sahli A, Ater M, Dorado FJ, Caperta AD, David TS, Solla A, Rodriguez-Gonzalez PM. Germination and seed traits in common alder ( Alnus spp.): the potential contribution of rear-edge populations to ecological restoration success. in Restoration Ecology. 2022;30(3).
doi:10.1111/rec.13517
conv_1573 .

Marques, Ines Gomes, Faria, Carla, Rodrigues Conceicao, Sofia Isabel, Jansson, Roland, Corcobado, Tamara, Milanović, Slobodan, Laurent, Yann, Bernez, Ivan, Dufour, Simon, Mandak, Bohumil, Ennouni, Hassan, Sahli, Abdelouahab, Ater, Mohammed, Dorado, Francisco Javier, Caperta, Ana Delaunay, David, Teresa Soares, Solla, Alejandro, Rodriguez-Gonzalez, Patricia Maria, "Germination and seed traits in common alder ( Alnus spp.): the potential contribution of rear-edge populations to ecological restoration success" in Restoration Ecology, 30, no. 3 (2022),
https://doi.org/10.1111/rec.13517 .,
conv_1573 .

TY  - JOUR
AU  - Jung, T.
AU  - Milenković, Ivan
AU  - Corcobado, Tamara
AU  - Majek, Tomas
AU  - Janousek, J.
AU  - Kudlacek, Tomas
AU  - Tomsovsky, M.
AU  - Nagy, Zoltan
AU  - Duran, A.
AU  - Tarigan, Marthin
AU  - von Stowasser, E. Sanfuentes
AU  - Singh, R.
AU  - Ferreira, M.
AU  - Webber, Joan
AU  - Scanu, Bruno
AU  - Chi, N. M.
AU  - Thu, P. Q.
AU  - Junaid, M.
AU  - Rosmana, A.
AU  - Baharuddin, B.
AU  - Kuswinanti, T.
AU  - Nasri, N.
AU  - Kageyama, K.
AU  - Hieno, A.
AU  - Masuya, H.
AU  - Uematsu, Seiji
AU  - Oliva, J.
AU  - Redondo, Miguel A.
AU  - Maia, C.
AU  - Matsiakh, I.
AU  - Kramarets, V.
AU  - O'Hanlon, R.
AU  - Tomić, Z.
AU  - Brasier, Clive M.
AU  - Horta Jung, Marilia
PY  - 2022
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1314
AB  - During extensive surveys of global Phytophthora diversity 14 new species detected in natural ecosystems in Chile, Indonesia, USA (Louisiana), Sweden, Ukraine and Vietnam were assigned to Phytophthora major Clade 10 based on a multigene phylogeny of nine nuclear and three mitochondrial gene regions. Clade 10 now comprises three subclades. Subclades 10a and 10b contain species with nonpapillate sporangia, a range of breeding systems and a mainly soil-and waterborne lifestyle. These include the previously described P. afrocarpa, P. gallica and P. intercalaris and eight of the new species: P. ludoviciana, P. procera, P. pseudogallica, P. scandinavica, P. subarctica, P. tenui- mura, P. tonkinensis and P. ukrainensis. In contrast, all species in Subclade 10c have papillate sporangia and are self-fertile (or homothallic) with an aerial lifestyle including the known P. boehmeriae, P. gondwanensis, P. kernoviae and P. morindae and the new species P. celebensis, P. chilensis, P. javanensis, P. multiglobulosa, P. pseudochilensis and P. pseudokernoviae. All new Phytophthora species differed from each other and from related species by their unique combinations of morphological characters, breeding systems, cardinal temperatures and growth rates. The biogeography and evolutionary history of Clade 10 are discussed. We propose that the three subclades originated via the early divergence of pre-Gondwanan ancestors  gt  175 Mya into water-and soilborne and aerially dispersed lineages and subsequently underwent multiple allopatric and sympatric radiations during their global spread.
T2  - Persoonia
T1  - Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications
EP  - 57
SP  - 1
VL  - 49
DO  - 10.3767/persoonia.2022.49.01
UR  - conv_1684
ER  - 

@article{
author = "Jung, T. and Milenković, Ivan and Corcobado, Tamara and Majek, Tomas and Janousek, J. and Kudlacek, Tomas and Tomsovsky, M. and Nagy, Zoltan and Duran, A. and Tarigan, Marthin and von Stowasser, E. Sanfuentes and Singh, R. and Ferreira, M. and Webber, Joan and Scanu, Bruno and Chi, N. M. and Thu, P. Q. and Junaid, M. and Rosmana, A. and Baharuddin, B. and Kuswinanti, T. and Nasri, N. and Kageyama, K. and Hieno, A. and Masuya, H. and Uematsu, Seiji and Oliva, J. and Redondo, Miguel A. and Maia, C. and Matsiakh, I. and Kramarets, V. and O'Hanlon, R. and Tomić, Z. and Brasier, Clive M. and Horta Jung, Marilia",
year = "2022",
abstract = "During extensive surveys of global Phytophthora diversity 14 new species detected in natural ecosystems in Chile, Indonesia, USA (Louisiana), Sweden, Ukraine and Vietnam were assigned to Phytophthora major Clade 10 based on a multigene phylogeny of nine nuclear and three mitochondrial gene regions. Clade 10 now comprises three subclades. Subclades 10a and 10b contain species with nonpapillate sporangia, a range of breeding systems and a mainly soil-and waterborne lifestyle. These include the previously described P. afrocarpa, P. gallica and P. intercalaris and eight of the new species: P. ludoviciana, P. procera, P. pseudogallica, P. scandinavica, P. subarctica, P. tenui- mura, P. tonkinensis and P. ukrainensis. In contrast, all species in Subclade 10c have papillate sporangia and are self-fertile (or homothallic) with an aerial lifestyle including the known P. boehmeriae, P. gondwanensis, P. kernoviae and P. morindae and the new species P. celebensis, P. chilensis, P. javanensis, P. multiglobulosa, P. pseudochilensis and P. pseudokernoviae. All new Phytophthora species differed from each other and from related species by their unique combinations of morphological characters, breeding systems, cardinal temperatures and growth rates. The biogeography and evolutionary history of Clade 10 are discussed. We propose that the three subclades originated via the early divergence of pre-Gondwanan ancestors  gt  175 Mya into water-and soilborne and aerially dispersed lineages and subsequently underwent multiple allopatric and sympatric radiations during their global spread.",
journal = "Persoonia",
title = "Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications",
pages = "57-1",
volume = "49",
doi = "10.3767/persoonia.2022.49.01",
url = "conv_1684"
}

Jung, T., Milenković, I., Corcobado, T., Majek, T., Janousek, J., Kudlacek, T., Tomsovsky, M., Nagy, Z., Duran, A., Tarigan, M., von Stowasser, E. S., Singh, R., Ferreira, M., Webber, J., Scanu, B., Chi, N. M., Thu, P. Q., Junaid, M., Rosmana, A., Baharuddin, B., Kuswinanti, T., Nasri, N., Kageyama, K., Hieno, A., Masuya, H., Uematsu, S., Oliva, J., Redondo, M. A., Maia, C., Matsiakh, I., Kramarets, V., O'Hanlon, R., Tomić, Z., Brasier, C. M.,& Horta Jung, M.. (2022). Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications. in Persoonia, 49, 1-57.
https://doi.org/10.3767/persoonia.2022.49.01
conv_1684

Jung T, Milenković I, Corcobado T, Majek T, Janousek J, Kudlacek T, Tomsovsky M, Nagy Z, Duran A, Tarigan M, von Stowasser ES, Singh R, Ferreira M, Webber J, Scanu B, Chi NM, Thu PQ, Junaid M, Rosmana A, Baharuddin B, Kuswinanti T, Nasri N, Kageyama K, Hieno A, Masuya H, Uematsu S, Oliva J, Redondo MA, Maia C, Matsiakh I, Kramarets V, O'Hanlon R, Tomić Z, Brasier CM, Horta Jung M. Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications. in Persoonia. 2022;49:1-57.
doi:10.3767/persoonia.2022.49.01
conv_1684 .

Jung, T., Milenković, Ivan, Corcobado, Tamara, Majek, Tomas, Janousek, J., Kudlacek, Tomas, Tomsovsky, M., Nagy, Zoltan, Duran, A., Tarigan, Marthin, von Stowasser, E. Sanfuentes, Singh, R., Ferreira, M., Webber, Joan, Scanu, Bruno, Chi, N. M., Thu, P. Q., Junaid, M., Rosmana, A., Baharuddin, B., Kuswinanti, T., Nasri, N., Kageyama, K., Hieno, A., Masuya, H., Uematsu, Seiji, Oliva, J., Redondo, Miguel A., Maia, C., Matsiakh, I., Kramarets, V., O'Hanlon, R., Tomić, Z., Brasier, Clive M., Horta Jung, Marilia, "Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications" in Persoonia, 49 (2022):1-57,
https://doi.org/10.3767/persoonia.2022.49.01 .,
conv_1684 .

TY  - JOUR
AU  - Jung, Thomas
AU  - Horta Jung, Marilia
AU  - Webber, Joan
AU  - Kageyama, Koji
AU  - Hieno, Ayaka
AU  - Masuya, Hayato
AU  - Uematsu, Seiji
AU  - Perez-Sierra, Ana
AU  - Harris, Anna R.
AU  - Forster, Jack
AU  - Rees, Helen
AU  - Scanu, Bruno
AU  - Patra, Sneha
AU  - Kudlacek, Tomas
AU  - Janousek, Josef
AU  - Corcobado, Tamara
AU  - Milenković, Ivan
AU  - Nagy, Zoltan
AU  - Csorba, Ildiko
AU  - Bakonyi, Jozsef
AU  - Brasier, Clive M.
PY  - 2021
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1217
AB  - As global plant trade expands, tree disease epidemics caused by pathogen introductions are increasing. Since ca 2000, the introduced oomycete Phytophthora ramorum has caused devastating epidemics in Europe and North America, spreading as four ancient clonal lineages, each of a single mating type, suggesting different geographical origins. We surveyed laurosilva forests for P. ramorum around Fansipan mountain on the Vietnam-China border and on Shikoku and Kyushu islands, southwest Japan. The surveys yielded 71 P. ramorum isolates which we assigned to eight new lineages, IC1 to IC5 from Vietnam and NP1 to NP3 from Japan, based on differences in colony characteristics, gene x environment responses and multigene phylogeny. Molecular phylogenetic trees and networks revealed the eight Asian lineages were dispersed across the topology of the introduced European and North American lineages. The deepest node within P. ramorum, the divergence of lineages NP1 and NP2, was estimated at 0.5 to 1.6 Myr. The Asian lineages were each of a single mating type, and at some locations, lineages of "opposite" mating type were present, suggesting opportunities for inter-lineage recombination. Based on the high level of phenotypic and phylogenetic diversity in the sample populations, the coalescence results and the absence of overt host symptoms, we conclude that P. ramorum comprises many anciently divergent lineages native to the laurosilva forests between eastern Indochina and Japan.
T2  - Journal of Fungi
T1  - The Destructive Tree Pathogen Phytophthora ramorum Originates from the Laurosilva Forests of East Asia
IS  - 3
VL  - 7
DO  - 10.3390/jof7030226
UR  - conv_1536
ER  - 

@article{
author = "Jung, Thomas and Horta Jung, Marilia and Webber, Joan and Kageyama, Koji and Hieno, Ayaka and Masuya, Hayato and Uematsu, Seiji and Perez-Sierra, Ana and Harris, Anna R. and Forster, Jack and Rees, Helen and Scanu, Bruno and Patra, Sneha and Kudlacek, Tomas and Janousek, Josef and Corcobado, Tamara and Milenković, Ivan and Nagy, Zoltan and Csorba, Ildiko and Bakonyi, Jozsef and Brasier, Clive M.",
year = "2021",
abstract = "As global plant trade expands, tree disease epidemics caused by pathogen introductions are increasing. Since ca 2000, the introduced oomycete Phytophthora ramorum has caused devastating epidemics in Europe and North America, spreading as four ancient clonal lineages, each of a single mating type, suggesting different geographical origins. We surveyed laurosilva forests for P. ramorum around Fansipan mountain on the Vietnam-China border and on Shikoku and Kyushu islands, southwest Japan. The surveys yielded 71 P. ramorum isolates which we assigned to eight new lineages, IC1 to IC5 from Vietnam and NP1 to NP3 from Japan, based on differences in colony characteristics, gene x environment responses and multigene phylogeny. Molecular phylogenetic trees and networks revealed the eight Asian lineages were dispersed across the topology of the introduced European and North American lineages. The deepest node within P. ramorum, the divergence of lineages NP1 and NP2, was estimated at 0.5 to 1.6 Myr. The Asian lineages were each of a single mating type, and at some locations, lineages of "opposite" mating type were present, suggesting opportunities for inter-lineage recombination. Based on the high level of phenotypic and phylogenetic diversity in the sample populations, the coalescence results and the absence of overt host symptoms, we conclude that P. ramorum comprises many anciently divergent lineages native to the laurosilva forests between eastern Indochina and Japan.",
journal = "Journal of Fungi",
title = "The Destructive Tree Pathogen Phytophthora ramorum Originates from the Laurosilva Forests of East Asia",
number = "3",
volume = "7",
doi = "10.3390/jof7030226",
url = "conv_1536"
}

Jung, T., Horta Jung, M., Webber, J., Kageyama, K., Hieno, A., Masuya, H., Uematsu, S., Perez-Sierra, A., Harris, A. R., Forster, J., Rees, H., Scanu, B., Patra, S., Kudlacek, T., Janousek, J., Corcobado, T., Milenković, I., Nagy, Z., Csorba, I., Bakonyi, J.,& Brasier, C. M.. (2021). The Destructive Tree Pathogen Phytophthora ramorum Originates from the Laurosilva Forests of East Asia. in Journal of Fungi, 7(3).
https://doi.org/10.3390/jof7030226
conv_1536

Jung T, Horta Jung M, Webber J, Kageyama K, Hieno A, Masuya H, Uematsu S, Perez-Sierra A, Harris AR, Forster J, Rees H, Scanu B, Patra S, Kudlacek T, Janousek J, Corcobado T, Milenković I, Nagy Z, Csorba I, Bakonyi J, Brasier CM. The Destructive Tree Pathogen Phytophthora ramorum Originates from the Laurosilva Forests of East Asia. in Journal of Fungi. 2021;7(3).
doi:10.3390/jof7030226
conv_1536 .

Jung, Thomas, Horta Jung, Marilia, Webber, Joan, Kageyama, Koji, Hieno, Ayaka, Masuya, Hayato, Uematsu, Seiji, Perez-Sierra, Ana, Harris, Anna R., Forster, Jack, Rees, Helen, Scanu, Bruno, Patra, Sneha, Kudlacek, Tomas, Janousek, Josef, Corcobado, Tamara, Milenković, Ivan, Nagy, Zoltan, Csorba, Ildiko, Bakonyi, Jozsef, Brasier, Clive M., "The Destructive Tree Pathogen Phytophthora ramorum Originates from the Laurosilva Forests of East Asia" in Journal of Fungi, 7, no. 3 (2021),
https://doi.org/10.3390/jof7030226 .,
conv_1536 .

TY  - JOUR
AU  - Jung, Thomas
AU  - Scanu, Bruno
AU  - Brasier, Clive M.
AU  - Webber, Joan
AU  - Milenković, Ivan
AU  - Corcobado, Tamara
AU  - Tomsovsky, Michal
AU  - Panek, Matej
AU  - Bakonyi, Jozsef
AU  - Maia, Cristiana
AU  - Bacova, Aneta
AU  - Raco, Milica
AU  - Rees, Helen
AU  - Perez-Sierra, Ana
AU  - Horta Jung, Marilia
PY  - 2020
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/1137
AB  - In 2016 and 2017, surveys of Phytophthora diversity were performed in 25 natural and semi-natural forest stands and 16 rivers in temperate and subtropical montane and tropical lowland regions of Vietnam. Using baiting assays from soil samples and rivers and direct isolations from naturally fallen leaves, 13 described species, five informally designated taxa and 21 previously unknown taxa of Phytophthora were isolated from 58 of the 91 soil samples (63.7%) taken from the rhizosphere of 52 of the 64 woody plant species sampled (81.3%) in 20 forest stands (83.7%), and from all rivers: P. capensis, P. citricola VII, VIII, IX, X and XI, P. sp. botryosa-like 2, P. sp. meadii-like 1 and 2, P. sp. tropicalis-like 2 and P. sp. multivesiculata-like 1 from Phytophthora major phylogenetic Clade 2; P. castaneae and P. heveae from Clade 5; P. chlamydospora, P. gregata, P. sp. bitahaiensis-like and P. sp. sylvatica-like 1, 2 and 3 from Clade 6; P. cinnamomi (Pc), P. parvispora, P. attenuata, P. sp. attenuata-like 1, 2 and 3 and P. xheterohybrida from Clade 7; P. drechsleri, P. pseudocryptogea, P. ramorum (Pr) and P. sp. kelmania from Clade 8, P. macrochlamydospora, P. sp. xinsolita-like, P. sp. xkunnunara-like, P. sp. xvirginiana-like s.l. and three new taxa, P. sp. quininea-like, P. sp. xGrenada 3-like and P. sp. xPeru 4-like, from Clade 9; and P. sp. gallica-like 1 and 2 from Clade 10. The Al and A2 mating types of both Pc and Pr co-occurred. The A2 mating type of Pc was associated with severe dieback of montane forests in northern Vietnam. Most other Phytophthora species, including Pr, were not associated with obvious disease symptoms. It is concluded that (1) Vietnam is within the center of origin of most Phytophthora taxa found including Pc and Pr, and (2) Phytophthora clades 2, 5, 6, 7, 8, 9, and 10 are native to Indochina.
T2  - Forests
T1  - A Survey in Natural Forest Ecosystems of Vietnam Reveals High Diversity of both New and Described Phytophthora Taxa including P . ramorum
IS  - 1
VL  - 11
DO  - 10.3390/f11010093
UR  - conv_1479
ER  - 

@article{
author = "Jung, Thomas and Scanu, Bruno and Brasier, Clive M. and Webber, Joan and Milenković, Ivan and Corcobado, Tamara and Tomsovsky, Michal and Panek, Matej and Bakonyi, Jozsef and Maia, Cristiana and Bacova, Aneta and Raco, Milica and Rees, Helen and Perez-Sierra, Ana and Horta Jung, Marilia",
year = "2020",
abstract = "In 2016 and 2017, surveys of Phytophthora diversity were performed in 25 natural and semi-natural forest stands and 16 rivers in temperate and subtropical montane and tropical lowland regions of Vietnam. Using baiting assays from soil samples and rivers and direct isolations from naturally fallen leaves, 13 described species, five informally designated taxa and 21 previously unknown taxa of Phytophthora were isolated from 58 of the 91 soil samples (63.7%) taken from the rhizosphere of 52 of the 64 woody plant species sampled (81.3%) in 20 forest stands (83.7%), and from all rivers: P. capensis, P. citricola VII, VIII, IX, X and XI, P. sp. botryosa-like 2, P. sp. meadii-like 1 and 2, P. sp. tropicalis-like 2 and P. sp. multivesiculata-like 1 from Phytophthora major phylogenetic Clade 2; P. castaneae and P. heveae from Clade 5; P. chlamydospora, P. gregata, P. sp. bitahaiensis-like and P. sp. sylvatica-like 1, 2 and 3 from Clade 6; P. cinnamomi (Pc), P. parvispora, P. attenuata, P. sp. attenuata-like 1, 2 and 3 and P. xheterohybrida from Clade 7; P. drechsleri, P. pseudocryptogea, P. ramorum (Pr) and P. sp. kelmania from Clade 8, P. macrochlamydospora, P. sp. xinsolita-like, P. sp. xkunnunara-like, P. sp. xvirginiana-like s.l. and three new taxa, P. sp. quininea-like, P. sp. xGrenada 3-like and P. sp. xPeru 4-like, from Clade 9; and P. sp. gallica-like 1 and 2 from Clade 10. The Al and A2 mating types of both Pc and Pr co-occurred. The A2 mating type of Pc was associated with severe dieback of montane forests in northern Vietnam. Most other Phytophthora species, including Pr, were not associated with obvious disease symptoms. It is concluded that (1) Vietnam is within the center of origin of most Phytophthora taxa found including Pc and Pr, and (2) Phytophthora clades 2, 5, 6, 7, 8, 9, and 10 are native to Indochina.",
journal = "Forests",
title = "A Survey in Natural Forest Ecosystems of Vietnam Reveals High Diversity of both New and Described Phytophthora Taxa including P . ramorum",
number = "1",
volume = "11",
doi = "10.3390/f11010093",
url = "conv_1479"
}

Jung, T., Scanu, B., Brasier, C. M., Webber, J., Milenković, I., Corcobado, T., Tomsovsky, M., Panek, M., Bakonyi, J., Maia, C., Bacova, A., Raco, M., Rees, H., Perez-Sierra, A.,& Horta Jung, M.. (2020). A Survey in Natural Forest Ecosystems of Vietnam Reveals High Diversity of both New and Described Phytophthora Taxa including P . ramorum. in Forests, 11(1).
https://doi.org/10.3390/f11010093
conv_1479

Jung T, Scanu B, Brasier CM, Webber J, Milenković I, Corcobado T, Tomsovsky M, Panek M, Bakonyi J, Maia C, Bacova A, Raco M, Rees H, Perez-Sierra A, Horta Jung M. A Survey in Natural Forest Ecosystems of Vietnam Reveals High Diversity of both New and Described Phytophthora Taxa including P . ramorum. in Forests. 2020;11(1).
doi:10.3390/f11010093
conv_1479 .

Jung, Thomas, Scanu, Bruno, Brasier, Clive M., Webber, Joan, Milenković, Ivan, Corcobado, Tamara, Tomsovsky, Michal, Panek, Matej, Bakonyi, Jozsef, Maia, Cristiana, Bacova, Aneta, Raco, Milica, Rees, Helen, Perez-Sierra, Ana, Horta Jung, Marilia, "A Survey in Natural Forest Ecosystems of Vietnam Reveals High Diversity of both New and Described Phytophthora Taxa including P . ramorum" in Forests, 11, no. 1 (2020),
https://doi.org/10.3390/f11010093 .,
conv_1479 .

TY  - JOUR
AU  - Milenković, Ivan
AU  - Keča, Nenad
AU  - Karadžić, Dragan
AU  - Radulović, Zlatan
AU  - Nowakowska, Justyna A.
AU  - Oszako, Tomasz
AU  - Sikora, Katarzyna
AU  - Corcobado, Tamara
AU  - Jung, Thomas
PY  - 2018
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/916
AB  - During a survey in three declining and three healthy poplar plantations in Serbia, six different Phytophthora species were obtained. Phytophthora plurivora was the most common, followed by P. pini, P. polonica, P. lacustris, P. cactorum, and P. gonapodyides. Pathogenicity of all isolated species to four-month and one-year-old cuttings of Populus hybrid clones I-214 and Pannonia, respectively, was tested using both a soil infestation and stem inoculation test. Isolates of P. polonica, P. x cambivora, P. cryptogea, and P. x serendipita from other host plants were included as a comparison. In the soil infestation test, the most aggressive species to clone I-214 were P. plurivora, P. x serendipita, and P. pini. On clone Pannonia, P. gonapodyides and P. pini were the most aggressive, both causing 100% mortality, followed by P. cactorum, P. x cambivora, and P. polonica. In the underbark inoculation test, the susceptibility of both poplar clones to the different Phytophthora species was largely similar, as in the soil infestation test, with the exception of P. polonica, which proved to be only weakly pathogenic to poplar bark. The most aggressive species to clone I-214 was P. pini, while on clone Pannonia, the longest lesions and highest disease incidence were caused by P. gonapodyides. Phytophthora cactorum and P. plurivora were pathogenic to both clones, whereas P. x cambivora showed only weak pathogenicity. The implications of these findings and possible pathways of dispersion of the pathogens are discussed.
T2  - Forests
T1  - Isolation and Pathogenicity of Phytophthora Species from Poplar Plantations in Serbia
IS  - 6
VL  - 9
DO  - 10.3390/f9060330
UR  - conv_1351
ER  - 

@article{
author = "Milenković, Ivan and Keča, Nenad and Karadžić, Dragan and Radulović, Zlatan and Nowakowska, Justyna A. and Oszako, Tomasz and Sikora, Katarzyna and Corcobado, Tamara and Jung, Thomas",
year = "2018",
abstract = "During a survey in three declining and three healthy poplar plantations in Serbia, six different Phytophthora species were obtained. Phytophthora plurivora was the most common, followed by P. pini, P. polonica, P. lacustris, P. cactorum, and P. gonapodyides. Pathogenicity of all isolated species to four-month and one-year-old cuttings of Populus hybrid clones I-214 and Pannonia, respectively, was tested using both a soil infestation and stem inoculation test. Isolates of P. polonica, P. x cambivora, P. cryptogea, and P. x serendipita from other host plants were included as a comparison. In the soil infestation test, the most aggressive species to clone I-214 were P. plurivora, P. x serendipita, and P. pini. On clone Pannonia, P. gonapodyides and P. pini were the most aggressive, both causing 100% mortality, followed by P. cactorum, P. x cambivora, and P. polonica. In the underbark inoculation test, the susceptibility of both poplar clones to the different Phytophthora species was largely similar, as in the soil infestation test, with the exception of P. polonica, which proved to be only weakly pathogenic to poplar bark. The most aggressive species to clone I-214 was P. pini, while on clone Pannonia, the longest lesions and highest disease incidence were caused by P. gonapodyides. Phytophthora cactorum and P. plurivora were pathogenic to both clones, whereas P. x cambivora showed only weak pathogenicity. The implications of these findings and possible pathways of dispersion of the pathogens are discussed.",
journal = "Forests",
title = "Isolation and Pathogenicity of Phytophthora Species from Poplar Plantations in Serbia",
number = "6",
volume = "9",
doi = "10.3390/f9060330",
url = "conv_1351"
}

Milenković, I., Keča, N., Karadžić, D., Radulović, Z., Nowakowska, J. A., Oszako, T., Sikora, K., Corcobado, T.,& Jung, T.. (2018). Isolation and Pathogenicity of Phytophthora Species from Poplar Plantations in Serbia. in Forests, 9(6).
https://doi.org/10.3390/f9060330
conv_1351

Milenković I, Keča N, Karadžić D, Radulović Z, Nowakowska JA, Oszako T, Sikora K, Corcobado T, Jung T. Isolation and Pathogenicity of Phytophthora Species from Poplar Plantations in Serbia. in Forests. 2018;9(6).
doi:10.3390/f9060330
conv_1351 .

Milenković, Ivan, Keča, Nenad, Karadžić, Dragan, Radulović, Zlatan, Nowakowska, Justyna A., Oszako, Tomasz, Sikora, Katarzyna, Corcobado, Tamara, Jung, Thomas, "Isolation and Pathogenicity of Phytophthora Species from Poplar Plantations in Serbia" in Forests, 9, no. 6 (2018),
https://doi.org/10.3390/f9060330 .,
conv_1351 .

TY  - JOUR
AU  - Jung, T.
AU  - Orlikowski, L.
AU  - Henricot, B.
AU  - Abad-Campos, P.
AU  - Aday, A. G.
AU  - Aguin Casal, O.
AU  - Bakonyi, J.
AU  - Cacciola, S. O.
AU  - Cech, T.
AU  - Chavarriaga, D.
AU  - Corcobado, Tamara
AU  - Cravador, A.
AU  - Decourcelle, T.
AU  - Denton, G.
AU  - Diamandis, S.
AU  - Dogmus-Lehtijaervi, H. T.
AU  - Franceschini, A.
AU  - Ginetti, B.
AU  - Green, Samantha
AU  - Glavendekić, Milka
AU  - Hantula, J.
AU  - Hartmann, G.
AU  - Herrero, M.
AU  - Ivić, D.
AU  - Horta Jung, M.
AU  - Lilja, A.
AU  - Keča, Nenad
AU  - Kramarets, V.
AU  - Lyubenova, A.
AU  - Machado, H.
AU  - Magnano di San Lio, G.
AU  - Mansilla Vazquez, P. J.
AU  - Marcais, B.
AU  - Matsiakh, I.
AU  - Milenković, Ivan
AU  - Moricca, S.
AU  - Nagy, Zoltan
AU  - Nechwatal, J.
AU  - Olsson, C.
AU  - Oszako, Tomasz
AU  - Pane, A.
AU  - Paplomatas, E. J.
AU  - Pintos Varela, C.
AU  - Prospero, Simone
AU  - Rial Martinez, C.
AU  - Rigling, D.
AU  - Robin, Cecile
AU  - Rytkoenen, A.
AU  - Sanchez, M. E.
AU  - Sanz Ros, A. V.
AU  - Scanu, Bruno
AU  - Schlenzig, A.
AU  - Schumacher, J.
AU  - Slavov, S.
AU  - Solla, Alejandro
AU  - Sousa, E.
AU  - Stenlid, J.
AU  - Talgo, Venche
AU  - Tomić, Z.
AU  - Tsopelas, Panaghiotis
AU  - Vannini, A.
AU  - Vettraino, Anna Maria
AU  - Wenneker, M.
AU  - Woodward, S.
AU  - Perez-Sierra, Ana
PY  - 2016
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/723
AB  - An analysis of incidence of Phytophthora spp. in 732 European nurseries producing forest transplants, larger specimen trees, landscape plants and ornamentals, plus 2525 areas in which trees and shrubs were planted, is presented based on work conducted by 38 research groups in 23 European countries between 1972 and 2013. Forty-nine Phytophthora taxa were recorded in 670 nurseries (91.5%); within these nurseries, 1614 of 1992 nursery stands (81.0%) were infested, although most affected plants appeared healthy. In forest and landscape plantings, 56 Phytophthora taxa were recovered from 1667 of 2525 tested sites (66.0%). Affected plants frequently showed symptoms such as crown thinning, chlorosis and dieback caused by extensive fine root losses and/or collar rot. Many well-known highly damaging host-Phytophthora combinations were frequently detected but 297 and 407 new Phytophthora-host associations were also observed in nurseries and plantings, respectively. On average, 1.3 Phytophthora species/taxa per infested nursery stand and planting site were isolated. At least 47 of the 68 Phytophthora species/taxa detected in nurseries and plantings were exotic species several of which are considered well established in both nurseries and plantings in Europe. Seven known Phytophthora species/taxa were found for the first time in Europe, while 10 taxa had not been previously recorded from nurseries or plantings; in addition, 5 taxa were first detections on woody plant species. Seven Phytophthora taxa were previously unknown to science. The reasons for these failures of plant biosecurity in Europe, implications for forest and semi-natural ecosystems and possible ways to improve biosecurity are discussed.
T2  - Forest Pathology
T1  - Widespread Phytophthora infestations in European nurseries put forest, semi-natural and horticultural ecosystems at high risk of Phytophthora diseases
EP  - 163
IS  - 2
SP  - 134
VL  - 46
DO  - 10.1111/efp.12239
UR  - conv_1209
ER  - 

@article{
author = "Jung, T. and Orlikowski, L. and Henricot, B. and Abad-Campos, P. and Aday, A. G. and Aguin Casal, O. and Bakonyi, J. and Cacciola, S. O. and Cech, T. and Chavarriaga, D. and Corcobado, Tamara and Cravador, A. and Decourcelle, T. and Denton, G. and Diamandis, S. and Dogmus-Lehtijaervi, H. T. and Franceschini, A. and Ginetti, B. and Green, Samantha and Glavendekić, Milka and Hantula, J. and Hartmann, G. and Herrero, M. and Ivić, D. and Horta Jung, M. and Lilja, A. and Keča, Nenad and Kramarets, V. and Lyubenova, A. and Machado, H. and Magnano di San Lio, G. and Mansilla Vazquez, P. J. and Marcais, B. and Matsiakh, I. and Milenković, Ivan and Moricca, S. and Nagy, Zoltan and Nechwatal, J. and Olsson, C. and Oszako, Tomasz and Pane, A. and Paplomatas, E. J. and Pintos Varela, C. and Prospero, Simone and Rial Martinez, C. and Rigling, D. and Robin, Cecile and Rytkoenen, A. and Sanchez, M. E. and Sanz Ros, A. V. and Scanu, Bruno and Schlenzig, A. and Schumacher, J. and Slavov, S. and Solla, Alejandro and Sousa, E. and Stenlid, J. and Talgo, Venche and Tomić, Z. and Tsopelas, Panaghiotis and Vannini, A. and Vettraino, Anna Maria and Wenneker, M. and Woodward, S. and Perez-Sierra, Ana",
year = "2016",
abstract = "An analysis of incidence of Phytophthora spp. in 732 European nurseries producing forest transplants, larger specimen trees, landscape plants and ornamentals, plus 2525 areas in which trees and shrubs were planted, is presented based on work conducted by 38 research groups in 23 European countries between 1972 and 2013. Forty-nine Phytophthora taxa were recorded in 670 nurseries (91.5%); within these nurseries, 1614 of 1992 nursery stands (81.0%) were infested, although most affected plants appeared healthy. In forest and landscape plantings, 56 Phytophthora taxa were recovered from 1667 of 2525 tested sites (66.0%). Affected plants frequently showed symptoms such as crown thinning, chlorosis and dieback caused by extensive fine root losses and/or collar rot. Many well-known highly damaging host-Phytophthora combinations were frequently detected but 297 and 407 new Phytophthora-host associations were also observed in nurseries and plantings, respectively. On average, 1.3 Phytophthora species/taxa per infested nursery stand and planting site were isolated. At least 47 of the 68 Phytophthora species/taxa detected in nurseries and plantings were exotic species several of which are considered well established in both nurseries and plantings in Europe. Seven known Phytophthora species/taxa were found for the first time in Europe, while 10 taxa had not been previously recorded from nurseries or plantings; in addition, 5 taxa were first detections on woody plant species. Seven Phytophthora taxa were previously unknown to science. The reasons for these failures of plant biosecurity in Europe, implications for forest and semi-natural ecosystems and possible ways to improve biosecurity are discussed.",
journal = "Forest Pathology",
title = "Widespread Phytophthora infestations in European nurseries put forest, semi-natural and horticultural ecosystems at high risk of Phytophthora diseases",
pages = "163-134",
number = "2",
volume = "46",
doi = "10.1111/efp.12239",
url = "conv_1209"
}

Jung, T., Orlikowski, L., Henricot, B., Abad-Campos, P., Aday, A. G., Aguin Casal, O., Bakonyi, J., Cacciola, S. O., Cech, T., Chavarriaga, D., Corcobado, T., Cravador, A., Decourcelle, T., Denton, G., Diamandis, S., Dogmus-Lehtijaervi, H. T., Franceschini, A., Ginetti, B., Green, S., Glavendekić, M., Hantula, J., Hartmann, G., Herrero, M., Ivić, D., Horta Jung, M., Lilja, A., Keča, N., Kramarets, V., Lyubenova, A., Machado, H., Magnano di San Lio, G., Mansilla Vazquez, P. J., Marcais, B., Matsiakh, I., Milenković, I., Moricca, S., Nagy, Z., Nechwatal, J., Olsson, C., Oszako, T., Pane, A., Paplomatas, E. J., Pintos Varela, C., Prospero, S., Rial Martinez, C., Rigling, D., Robin, C., Rytkoenen, A., Sanchez, M. E., Sanz Ros, A. V., Scanu, B., Schlenzig, A., Schumacher, J., Slavov, S., Solla, A., Sousa, E., Stenlid, J., Talgo, V., Tomić, Z., Tsopelas, P., Vannini, A., Vettraino, A. M., Wenneker, M., Woodward, S.,& Perez-Sierra, A.. (2016). Widespread Phytophthora infestations in European nurseries put forest, semi-natural and horticultural ecosystems at high risk of Phytophthora diseases. in Forest Pathology, 46(2), 134-163.
https://doi.org/10.1111/efp.12239
conv_1209

Jung T, Orlikowski L, Henricot B, Abad-Campos P, Aday AG, Aguin Casal O, Bakonyi J, Cacciola SO, Cech T, Chavarriaga D, Corcobado T, Cravador A, Decourcelle T, Denton G, Diamandis S, Dogmus-Lehtijaervi HT, Franceschini A, Ginetti B, Green S, Glavendekić M, Hantula J, Hartmann G, Herrero M, Ivić D, Horta Jung M, Lilja A, Keča N, Kramarets V, Lyubenova A, Machado H, Magnano di San Lio G, Mansilla Vazquez PJ, Marcais B, Matsiakh I, Milenković I, Moricca S, Nagy Z, Nechwatal J, Olsson C, Oszako T, Pane A, Paplomatas EJ, Pintos Varela C, Prospero S, Rial Martinez C, Rigling D, Robin C, Rytkoenen A, Sanchez ME, Sanz Ros AV, Scanu B, Schlenzig A, Schumacher J, Slavov S, Solla A, Sousa E, Stenlid J, Talgo V, Tomić Z, Tsopelas P, Vannini A, Vettraino AM, Wenneker M, Woodward S, Perez-Sierra A. Widespread Phytophthora infestations in European nurseries put forest, semi-natural and horticultural ecosystems at high risk of Phytophthora diseases. in Forest Pathology. 2016;46(2):134-163.
doi:10.1111/efp.12239
conv_1209 .

Jung, T., Orlikowski, L., Henricot, B., Abad-Campos, P., Aday, A. G., Aguin Casal, O., Bakonyi, J., Cacciola, S. O., Cech, T., Chavarriaga, D., Corcobado, Tamara, Cravador, A., Decourcelle, T., Denton, G., Diamandis, S., Dogmus-Lehtijaervi, H. T., Franceschini, A., Ginetti, B., Green, Samantha, Glavendekić, Milka, Hantula, J., Hartmann, G., Herrero, M., Ivić, D., Horta Jung, M., Lilja, A., Keča, Nenad, Kramarets, V., Lyubenova, A., Machado, H., Magnano di San Lio, G., Mansilla Vazquez, P. J., Marcais, B., Matsiakh, I., Milenković, Ivan, Moricca, S., Nagy, Zoltan, Nechwatal, J., Olsson, C., Oszako, Tomasz, Pane, A., Paplomatas, E. J., Pintos Varela, C., Prospero, Simone, Rial Martinez, C., Rigling, D., Robin, Cecile, Rytkoenen, A., Sanchez, M. E., Sanz Ros, A. V., Scanu, Bruno, Schlenzig, A., Schumacher, J., Slavov, S., Solla, Alejandro, Sousa, E., Stenlid, J., Talgo, Venche, Tomić, Z., Tsopelas, Panaghiotis, Vannini, A., Vettraino, Anna Maria, Wenneker, M., Woodward, S., Perez-Sierra, Ana, "Widespread Phytophthora infestations in European nurseries put forest, semi-natural and horticultural ecosystems at high risk of Phytophthora diseases" in Forest Pathology, 46, no. 2 (2016):134-163,
https://doi.org/10.1111/efp.12239 .,
conv_1209 .

TY  - JOUR
AU  - Solla, Alejandro
AU  - Milanović, Slobodan
AU  - Gallardo, Alejandro
AU  - Bueno, Ana
AU  - Corcobado, Tamara
AU  - Caceres, Yonatan
AU  - Morcuende, David
AU  - Quesada, Alberto
AU  - Moreno, Gerardo
AU  - Pulido, Fernando
PY  - 2016
UR  - https://omorika.sfb.bg.ac.rs/handle/123456789/796
AB  - Genetic variability of trees influences the chemical composition of tissues. This determines herbivore impact and, consequently, herbivore performance. We evaluated the independent effects of plant genotype and provenance on the tannin content of holm oak (Quercus ilex) and their consequences for herbivory and performance of gypsy moth (Lymantria dispar) larvae. Oak seedlings of 48 open-pollinated families from six populations were grown in a common garden in central Spain. Half the plants were subjected to defoliation by gypsy moth larvae and the other half were destructively sampled for chemical analysis. Tannin content of leaves did not differ significantly among populations but differed significantly among families. Estimates of heritability (h(2)) and quantitative genetic differentiation among populations for tannin content (Q(ST)) were 0.83 and 0.12, respectively. Defoliation was not related to the tannin content of plants nor to spine and trichome densities of leaves, although positive family-mean associations were observed between defoliation and both seed weight and plant height (P  lt  0.003). Among the oak populations, differential increase in larval weight gain with defoliation was observed. Leaf tannin content in Q. ilex is genetically controlled but does not influence defoliation or predict performance of the larvae. Different efficiencies of food utilisation depending on the oak genotypes indicate that other plant traits are influencing the feeding patterns and fitness of L. dispar and consequent population dynamics.
T2  - Tree Genetics & Genomes
T1  - Genetic determination of tannins and herbivore resistance in Quercus ilex
IS  - 6
VL  - 12
DO  - 10.1007/s11295-016-1069-9
UR  - conv_1259
ER  - 

@article{
author = "Solla, Alejandro and Milanović, Slobodan and Gallardo, Alejandro and Bueno, Ana and Corcobado, Tamara and Caceres, Yonatan and Morcuende, David and Quesada, Alberto and Moreno, Gerardo and Pulido, Fernando",
year = "2016",
abstract = "Genetic variability of trees influences the chemical composition of tissues. This determines herbivore impact and, consequently, herbivore performance. We evaluated the independent effects of plant genotype and provenance on the tannin content of holm oak (Quercus ilex) and their consequences for herbivory and performance of gypsy moth (Lymantria dispar) larvae. Oak seedlings of 48 open-pollinated families from six populations were grown in a common garden in central Spain. Half the plants were subjected to defoliation by gypsy moth larvae and the other half were destructively sampled for chemical analysis. Tannin content of leaves did not differ significantly among populations but differed significantly among families. Estimates of heritability (h(2)) and quantitative genetic differentiation among populations for tannin content (Q(ST)) were 0.83 and 0.12, respectively. Defoliation was not related to the tannin content of plants nor to spine and trichome densities of leaves, although positive family-mean associations were observed between defoliation and both seed weight and plant height (P  lt  0.003). Among the oak populations, differential increase in larval weight gain with defoliation was observed. Leaf tannin content in Q. ilex is genetically controlled but does not influence defoliation or predict performance of the larvae. Different efficiencies of food utilisation depending on the oak genotypes indicate that other plant traits are influencing the feeding patterns and fitness of L. dispar and consequent population dynamics.",
journal = "Tree Genetics & Genomes",
title = "Genetic determination of tannins and herbivore resistance in Quercus ilex",
number = "6",
volume = "12",
doi = "10.1007/s11295-016-1069-9",
url = "conv_1259"
}

Solla, A., Milanović, S., Gallardo, A., Bueno, A., Corcobado, T., Caceres, Y., Morcuende, D., Quesada, A., Moreno, G.,& Pulido, F.. (2016). Genetic determination of tannins and herbivore resistance in Quercus ilex. in Tree Genetics & Genomes, 12(6).
https://doi.org/10.1007/s11295-016-1069-9
conv_1259

Solla A, Milanović S, Gallardo A, Bueno A, Corcobado T, Caceres Y, Morcuende D, Quesada A, Moreno G, Pulido F. Genetic determination of tannins and herbivore resistance in Quercus ilex. in Tree Genetics & Genomes. 2016;12(6).
doi:10.1007/s11295-016-1069-9
conv_1259 .

Solla, Alejandro, Milanović, Slobodan, Gallardo, Alejandro, Bueno, Ana, Corcobado, Tamara, Caceres, Yonatan, Morcuende, David, Quesada, Alberto, Moreno, Gerardo, Pulido, Fernando, "Genetic determination of tannins and herbivore resistance in Quercus ilex" in Tree Genetics & Genomes, 12, no. 6 (2016),
https://doi.org/10.1007/s11295-016-1069-9 .,
conv_1259 .